Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC067838.1-201ENST00000606064 577 ntBASIC5.03□□□□□ -1.6
CDH6P55285 AP001521.2-201ENST00000608772 546 ntBASIC5.03□□□□□ -1.6
CDH6P55285 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
CDH6P55285 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH6P55285 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH6P55285 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH6P55285 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH6P55285 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH6P55285 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH6P55285 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CDH6P55285 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CDH6P55285 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH6P55285 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH6P55285 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH6P55285 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH6P55285 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH6P55285 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH6P55285 GAPDHP15-201ENST00000398586 975 ntBASIC5.02□□□□□ -1.61
CDH6P55285 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH6P55285 U3.35-201ENST00000408405 208 ntBASIC5.02□□□□□ -1.61
CDH6P55285 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH6P55285 NPM1P40-201ENST00000412758 733 ntBASIC5.02□□□□□ -1.61
CDH6P55285 AC098592.2-201ENST00000413158 265 ntBASIC5.02□□□□□ -1.61
CDH6P55285 CHEK2P3-201ENST00000416118 248 ntBASIC5.02□□□□□ -1.61
CDH6P55285 OR13Z1P-201ENST00000416141 834 ntBASIC5.02□□□□□ -1.61
CDH6P55285 RPL36AP10-201ENST00000421785 322 ntBASIC5.02□□□□□ -1.61
CDH6P55285 TRGV7-201ENST00000427089 353 ntBASIC5.02□□□□□ -1.61
CDH6P55285 AL451139.1-201ENST00000434718 346 ntBASIC5.02□□□□□ -1.61
CDH6P55285 PRPF38AP2-201ENST00000438179 851 ntBASIC5.02□□□□□ -1.61
CDH6P55285 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH6P55285 AC004453.1-201ENST00000487895 408 ntBASIC5.02□□□□□ -1.61
CDH6P55285 AC020890.1-201ENST00000491837 504 ntBASIC5.02□□□□□ -1.61
CDH6P55285 RN7SL591P-201ENST00000496150 292 ntBASIC5.02□□□□□ -1.61
CDH6P55285 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.02□□□□□ -1.61
CDH6P55285 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH6P55285 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH6P55285 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.02□□□□□ -1.61
CDH6P55285 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH6P55285 AC020910.3-201ENST00000603701 874 ntBASIC5.02□□□□□ -1.61
CDH6P55285 AC013244.1-201ENST00000604279 193 ntBASIC5.02□□□□□ -1.61
CDH6P55285 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH6P55285 AL445222.1-201ENST00000607259 628 ntBASIC5.02□□□□□ -1.61
CDH6P55285 AL159169.2-201ENST00000610061 1269 ntBASIC5.02□□□□□ -1.61
CDH6P55285 MIR7155-201ENST00000615925 56 ntBASIC5.02□□□□□ -1.61
CDH6P55285 BNIP3P41-202ENST00000616656 861 ntBASIC5.02□□□□□ -1.61
CDH6P55285 AP001005.3-201ENST00000622049 129 ntBASIC5.02□□□□□ -1.61
CDH6P55285 CR381572.2-201ENST00000624852 397 ntBASIC5.02□□□□□ -1.61
CDH6P55285 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH6P55285 AC006453.5-201ENST00000636451 619 ntBASIC5.02□□□□□ -1.61
CDH6P55285 AC021242.1-201ENST00000507315 2035 ntBASIC5.02□□□□□ -1.61
CDH6P55285 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH6P55285 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH6P55285 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH6P55285 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CDH6P55285 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH6P55285 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH6P55285 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 AL645927.1-201ENST00000396783 406 ntBASIC5.01□□□□□ -1.61
CDH6P55285 RN7SKP278-201ENST00000410504 342 ntBASIC5.01□□□□□ -1.61
CDH6P55285 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH6P55285 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH6P55285 RPS26P4-201ENST00000431743 355 ntBASIC5.01□□□□□ -1.61
CDH6P55285 RPS17P8-201ENST00000434525 335 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH6P55285 RAB9AP5-201ENST00000437794 597 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AC004938.1-201ENST00000438468 308 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AL450263.2-201ENST00000439400 589 ntBASIC5.01□□□□□ -1.61
CDH6P55285 RAB9AP2-201ENST00000443911 597 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AC112498.1-201ENST00000444401 332 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH6P55285 TRY2P-201ENST00000448860 689 ntBASIC5.01□□□□□ -1.61
CDH6P55285 SLC25A18P1-201ENST00000449385 454 ntBASIC5.01□□□□□ -1.61
CDH6P55285 RN7SL808P-201ENST00000496066 299 ntBASIC5.01□□□□□ -1.61
CDH6P55285 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH6P55285 RPS27AP18-201ENST00000515536 459 ntBASIC5.01□□□□□ -1.61
CDH6P55285 RN7SKP34-201ENST00000516142 244 ntBASIC5.01□□□□□ -1.61
CDH6P55285 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH6P55285 MORF4L1P3-201ENST00000525966 950 ntBASIC5.01□□□□□ -1.61
CDH6P55285 OR8A2P-201ENST00000528631 952 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH6P55285 DUX4L52-201ENST00000549363 777 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AC093249.4-201ENST00000564755 259 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH6P55285 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH6P55285 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH6P55285 AC011487.3-201ENST00000593607 453 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AL121932.1-201ENST00000605542 214 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH6P55285 AL354950.1-201ENST00000614150 568 ntBASIC5.01□□□□□ -1.61
CDH6P55285 MIR8069-1-201ENST00000616627 86 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AL121890.2-201ENST00000617644 465 ntBASIC5.01□□□□□ -1.61
CDH6P55285 AL158062.1-201ENST00000619632 745 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms