Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH4P55283 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CDH4P55283 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH4P55283 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH4P55283 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH4P55283 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH4P55283 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH4P55283 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH4P55283 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH4P55283 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CDH4P55283 MAPK10-263ENST00000641052 4307 ntBASIC5.02□□□□□ -1.61
CDH4P55283 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CDH4P55283 AC017079.1-201ENST00000333650 415 ntBASIC5.02□□□□□ -1.61
CDH4P55283 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH4P55283 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH4P55283 AC016769.2-201ENST00000414815 475 ntBASIC5.02□□□□□ -1.61
CDH4P55283 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH4P55283 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH4P55283 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH4P55283 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH4P55283 AC092162.1-201ENST00000432828 434 ntBASIC5.02□□□□□ -1.61
CDH4P55283 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH4P55283 AL589765.3-201ENST00000446084 462 ntBASIC5.02□□□□□ -1.61
CDH4P55283 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH4P55283 SBDSP1-204ENST00000453858 737 ntBASIC5.02□□□□□ -1.61
CDH4P55283 AC091685.2-201ENST00000454924 864 ntBASIC5.02□□□□□ -1.61
CDH4P55283 AURKAPS2-201ENST00000454983 333 ntBASIC5.02□□□□□ -1.61
CDH4P55283 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH4P55283 RPL35AP28-201ENST00000459730 331 ntBASIC5.02□□□□□ -1.61
CDH4P55283 AC083982.1-201ENST00000485679 344 ntBASIC5.02□□□□□ -1.61
CDH4P55283 AL133372.1-201ENST00000493565 745 ntBASIC5.02□□□□□ -1.61
CDH4P55283 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH4P55283 AC026688.1-201ENST00000520639 1168 ntBASIC5.02□□□□□ -1.61
CDH4P55283 EIF4A2P5-201ENST00000529914 499 ntBASIC5.02□□□□□ -1.61
CDH4P55283 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH4P55283 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH4P55283 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH4P55283 AL031320.1-201ENST00000604177 357 ntBASIC5.02□□□□□ -1.61
CDH4P55283 AP001784.1-201ENST00000624107 428 ntBASIC5.02□□□□□ -1.61
CDH4P55283 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.02□□□□□ -1.61
CDH4P55283 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
CDH4P55283 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CDH4P55283 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH4P55283 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.02□□□□□ -1.61
CDH4P55283 SAMMSON-226ENST00000642089 1582 ntBASIC5.02□□□□□ -1.61
CDH4P55283 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
CDH4P55283 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CDH4P55283 AC011755.1-201ENST00000623763 2049 ntBASIC5.02□□□□□ -1.61
CDH4P55283 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CDH4P55283 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.02□□□□□ -1.61
CDH4P55283 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.02□□□□□ -1.61
CDH4P55283 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CDH4P55283 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CDH4P55283 SDAD1P1-202ENST00000524156 2051 ntBASIC5.01□□□□□ -1.61
CDH4P55283 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH4P55283 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CDH4P55283 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH4P55283 AC114755.2-201ENST00000413520 361 ntBASIC5.01□□□□□ -1.61
CDH4P55283 OR13Z1P-201ENST00000416141 834 ntBASIC5.01□□□□□ -1.61
CDH4P55283 RBMY2KP-201ENST00000418221 992 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AC104333.2-201ENST00000422630 192 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AC006466.1-201ENST00000438721 289 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AL772161.1-201ENST00000439130 476 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH4P55283 AC234781.3-201ENST00000452540 973 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AL356981.1-201ENST00000454879 684 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AL356390.1-201ENST00000455684 397 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AC063943.1-201ENST00000465434 453 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH4P55283 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH4P55283 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH4P55283 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH4P55283 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH4P55283 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH4P55283 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CDH4P55283 MIR4737-201ENST00000583979 81 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AC011453.2-201ENST00000603737 729 ntBASIC5.01□□□□□ -1.61
CDH4P55283 AC007497.1-201ENST00000610421 561 ntBASIC5.01□□□□□ -1.61
CDH4P55283 Mico1.1-201ENST00000611698 204 ntBASIC5.01□□□□□ -1.61
CDH4P55283 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH4P55283 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CDH4P55283 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH4P55283 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
CDH4P55283 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH4P55283 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH4P55283 SMG1P4-204ENST00000523028 4131 ntBASIC5.01□□□□□ -1.61
CDH4P55283 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH4P55283 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 ZNF652P1-201ENST00000442420 1309 ntBASIC5□□□□□ -1.61
CDH4P55283 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5□□□□□ -1.61
CDH4P55283 AC132825.1-201ENST00000463573 2247 ntBASIC5□□□□□ -1.61
CDH4P55283 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5□□□□□ -1.61
CDH4P55283 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CDH4P55283 RN7SKP103-201ENST00000363848 320 ntBASIC5□□□□□ -1.61
CDH4P55283 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDH4P55283 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH4P55283 OR13C3-201ENST00000374781 1108 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms