Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC8.71□□□□□ -1.02
ATN1P54259 SNX18P3-201ENST00000424993 835 ntBASIC8.71□□□□□ -1.02
ATN1P54259 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC8.71□□□□□ -1.02
ATN1P54259 RPSAP65-201ENST00000429660 595 ntBASIC8.71□□□□□ -1.02
ATN1P54259 AC103987.1-201ENST00000473394 348 ntBASIC8.71□□□□□ -1.02
ATN1P54259 AC092349.1-201ENST00000504903 310 ntBASIC8.71□□□□□ -1.02
ATN1P54259 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC8.71□□□□□ -1.02
ATN1P54259 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC8.71□□□□□ -1.02
ATN1P54259 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.71□□□□□ -1.02
ATN1P54259 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC8.71□□□□□ -1.02
ATN1P54259 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC8.71□□□□□ -1.02
ATN1P54259 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC8.71□□□□□ -1.02
ATN1P54259 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ATN1P54259 AC010900.2-201ENST00000604508 210 ntBASIC8.71□□□□□ -1.02
ATN1P54259 U1.22-201ENST00000605806 164 ntBASIC8.71□□□□□ -1.02
ATN1P54259 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.71□□□□□ -1.02
ATN1P54259 AL138693.1-201ENST00000622219 129 ntBASIC8.71□□□□□ -1.02
ATN1P54259 AC026634.1-201ENST00000634369 198 ntBASIC8.71□□□□□ -1.02
ATN1P54259 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
ATN1P54259 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
ATN1P54259 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC8.71□□□□□ -1.02
ATN1P54259 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ATN1P54259 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
ATN1P54259 UQCRC2P1-201ENST00000417777 1332 ntBASIC8.71□□□□□ -1.02
ATN1P54259 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.71□□□□□ -1.02
ATN1P54259 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC8.71□□□□□ -1.02
ATN1P54259 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
ATN1P54259 AC008937.3-201ENST00000606813 1700 ntBASIC8.71□□□□□ -1.02
ATN1P54259 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ATN1P54259 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
ATN1P54259 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ATN1P54259 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ATN1P54259 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
ATN1P54259 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.7□□□□□ -1.02
ATN1P54259 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
ATN1P54259 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ATN1P54259 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
ATN1P54259 AC093297.3-201ENST00000607056 2517 ntBASIC8.7□□□□□ -1.02
ATN1P54259 AL139276.1-201ENST00000311910 1001 ntBASIC8.7□□□□□ -1.02
ATN1P54259 Y_RNA.19-201ENST00000362462 99 ntBASIC8.7□□□□□ -1.02
ATN1P54259 Y_RNA.65-201ENST00000362846 100 ntBASIC8.7□□□□□ -1.02
ATN1P54259 RN7SKP250-201ENST00000363924 321 ntBASIC8.7□□□□□ -1.02
ATN1P54259 RNA5SP79-201ENST00000365193 109 ntBASIC8.7□□□□□ -1.02
ATN1P54259 RNVU1-15-201ENST00000384476 165 ntBASIC8.7□□□□□ -1.02
ATN1P54259 AL136133.1-201ENST00000413694 376 ntBASIC8.7□□□□□ -1.02
ATN1P54259 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC8.7□□□□□ -1.02
ATN1P54259 RPS20P5-201ENST00000434808 360 ntBASIC8.7□□□□□ -1.02
ATN1P54259 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC8.7□□□□□ -1.02
ATN1P54259 AL138787.1-202ENST00000437804 898 ntBASIC8.7□□□□□ -1.02
ATN1P54259 HSPE1P22-201ENST00000456856 327 ntBASIC8.7□□□□□ -1.02
ATN1P54259 RNU7-180P-201ENST00000459240 63 ntBASIC8.7□□□□□ -1.02
ATN1P54259 RPS3P7-201ENST00000488662 726 ntBASIC8.7□□□□□ -1.02
ATN1P54259 RPS27P26-201ENST00000494583 239 ntBASIC8.7□□□□□ -1.02
ATN1P54259 RN7SL516P-201ENST00000496127 297 ntBASIC8.7□□□□□ -1.02
ATN1P54259 HMGN1P9-201ENST00000515212 298 ntBASIC8.7□□□□□ -1.02
ATN1P54259 RNU7-200P-201ENST00000516105 62 ntBASIC8.7□□□□□ -1.02
ATN1P54259 Y_RNA.670-201ENST00000516255 105 ntBASIC8.7□□□□□ -1.02
ATN1P54259 SNORA40.15-201ENST00000516884 107 ntBASIC8.7□□□□□ -1.02
ATN1P54259 IGKV2-38-201ENST00000517443 247 ntBASIC8.7□□□□□ -1.02
ATN1P54259 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ATN1P54259 TRIM51DP-201ENST00000529746 596 ntBASIC8.7□□□□□ -1.02
ATN1P54259 AP002392.1-201ENST00000537692 208 ntBASIC8.7□□□□□ -1.02
ATN1P54259 CBX3P4-201ENST00000538909 354 ntBASIC8.7□□□□□ -1.02
ATN1P54259 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.7□□□□□ -1.02
ATN1P54259 DNM1P31-201ENST00000564149 696 ntBASIC8.7□□□□□ -1.02
ATN1P54259 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.7□□□□□ -1.02
ATN1P54259 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC8.7□□□□□ -1.02
ATN1P54259 AL138825.1-201ENST00000618587 192 ntBASIC8.7□□□□□ -1.02
ATN1P54259 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC8.7□□□□□ -1.02
ATN1P54259 AC243725.1-201ENST00000637164 436 ntBASIC8.7□□□□□ -1.02
ATN1P54259 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.7□□□□□ -1.02
ATN1P54259 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ATN1P54259 HSPD1P4-201ENST00000547203 1702 ntBASIC8.7□□□□□ -1.02
ATN1P54259 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
ATN1P54259 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
ATN1P54259 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.7□□□□□ -1.02
ATN1P54259 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.7□□□□□ -1.02
ATN1P54259 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
ATN1P54259 FOXR2-201ENST00000339140 1926 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
ATN1P54259 AC090983.1-201ENST00000623426 3897 ntBASIC8.7□□□□□ -1.02
ATN1P54259 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
ATN1P54259 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
ATN1P54259 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
ATN1P54259 ANKRD6-218ENST00000522441 3157 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
ATN1P54259 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
ATN1P54259 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
ATN1P54259 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.69□□□□□ -1.02
ATN1P54259 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
ATN1P54259 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
ATN1P54259 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
ATN1P54259 Y_RNA.367-201ENST00000365544 101 ntBASIC8.69□□□□□ -1.02
ATN1P54259 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
ATN1P54259 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.69□□□□□ -1.02
ATN1P54259 SNORA22C-201ENST00000384614 134 ntBASIC8.69□□□□□ -1.02
ATN1P54259 AC092634.6-201ENST00000418558 192 ntBASIC8.69□□□□□ -1.02
ATN1P54259 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC8.69□□□□□ -1.02
ATN1P54259 AL359633.1-201ENST00000421403 310 ntBASIC8.69□□□□□ -1.02
ATN1P54259 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC8.69□□□□□ -1.02
ATN1P54259 SNX19-202ENST00000426933 888 ntTSL 2 BASIC8.69□□□□□ -1.02
ATN1P54259 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms