Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.73□□□□□ -1.49
COPB1P53618 THAP12P5-201ENST00000405864 2275 ntBASIC5.73□□□□□ -1.49
COPB1P53618 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 AC010266.2-201ENST00000564741 3255 ntBASIC5.73□□□□□ -1.49
COPB1P53618 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.73□□□□□ -1.49
COPB1P53618 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COPB1P53618 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
COPB1P53618 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 MIR16-2-201ENST00000362117 81 ntBASIC5.72□□□□□ -1.49
COPB1P53618 RN7SKP74-201ENST00000362849 309 ntBASIC5.72□□□□□ -1.49
COPB1P53618 RNA5SP335-201ENST00000363817 110 ntBASIC5.72□□□□□ -1.49
COPB1P53618 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.72□□□□□ -1.49
COPB1P53618 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.72□□□□□ -1.49
COPB1P53618 RNU1-74P-201ENST00000384108 171 ntBASIC5.72□□□□□ -1.49
COPB1P53618 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 BX664727.1-201ENST00000416024 466 ntBASIC5.72□□□□□ -1.49
COPB1P53618 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.72□□□□□ -1.49
COPB1P53618 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.72□□□□□ -1.49
COPB1P53618 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.72□□□□□ -1.49
COPB1P53618 DSTNP5-201ENST00000427921 523 ntBASIC5.72□□□□□ -1.49
COPB1P53618 AC064862.4-201ENST00000442180 334 ntBASIC5.72□□□□□ -1.49
COPB1P53618 RPL7AP61-201ENST00000443410 636 ntBASIC5.72□□□□□ -1.49
COPB1P53618 AC069277.2-201ENST00000454211 432 ntBASIC5.72□□□□□ -1.49
COPB1P53618 AC023141.9-201ENST00000458734 412 ntBASIC5.72□□□□□ -1.49
COPB1P53618 PPM1AP1-201ENST00000502740 1135 ntBASIC5.72□□□□□ -1.49
COPB1P53618 AP006245.2-201ENST00000522004 300 ntBASIC5.72□□□□□ -1.49
COPB1P53618 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.72□□□□□ -1.49
COPB1P53618 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.72□□□□□ -1.49
COPB1P53618 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.72□□□□□ -1.49
COPB1P53618 AC004923.2-201ENST00000529649 369 ntBASIC5.72□□□□□ -1.49
COPB1P53618 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.72□□□□□ -1.49
COPB1P53618 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.72□□□□□ -1.49
COPB1P53618 AC013244.1-201ENST00000604279 193 ntBASIC5.72□□□□□ -1.49
COPB1P53618 AC124016.2-201ENST00000610058 665 ntBASIC5.72□□□□□ -1.49
COPB1P53618 RN7SL787P-201ENST00000613000 284 ntBASIC5.72□□□□□ -1.49
COPB1P53618 CYCSP41-201ENST00000616920 296 ntBASIC5.72□□□□□ -1.49
COPB1P53618 AC118658.2-201ENST00000618697 459 ntBASIC5.72□□□□□ -1.49
COPB1P53618 Z99129.2-201ENST00000619967 314 ntBASIC5.72□□□□□ -1.49
COPB1P53618 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
COPB1P53618 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.72□□□□□ -1.49
COPB1P53618 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.72□□□□□ -1.49
COPB1P53618 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.72□□□□□ -1.49
COPB1P53618 AL590396.4-201ENST00000636779 956 ntBASIC5.72□□□□□ -1.49
COPB1P53618 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
COPB1P53618 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.72□□□□□ -1.49
COPB1P53618 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COPB1P53618 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
COPB1P53618 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
COPB1P53618 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COPB1P53618 AL731532.2-201ENST00000623542 1953 ntBASIC5.71□□□□□ -1.49
COPB1P53618 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.49
COPB1P53618 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
COPB1P53618 TCP11X1-202ENST00000622971 1372 ntBASIC5.71□□□□□ -1.5
COPB1P53618 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.71□□□□□ -1.5
COPB1P53618 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COPB1P53618 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.71□□□□□ -1.5
COPB1P53618 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPB1P53618 MIR105-1-201ENST00000385222 81 ntBASIC5.71□□□□□ -1.5
COPB1P53618 RPL22P22-201ENST00000395439 379 ntBASIC5.71□□□□□ -1.5
COPB1P53618 ANAPC10P1-201ENST00000395991 556 ntBASIC5.71□□□□□ -1.5
COPB1P53618 U3.32-201ENST00000408116 212 ntBASIC5.71□□□□□ -1.5
COPB1P53618 CTSL3P-202ENST00000412179 788 ntBASIC5.71□□□□□ -1.5
COPB1P53618 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.71□□□□□ -1.5
COPB1P53618 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.71□□□□□ -1.5
COPB1P53618 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPB1P53618 AC009238.2-201ENST00000431026 355 ntBASIC5.71□□□□□ -1.5
COPB1P53618 AL161722.2-201ENST00000434731 981 ntBASIC5.71□□□□□ -1.5
COPB1P53618 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.71□□□□□ -1.5
COPB1P53618 AL009048.1-201ENST00000450437 298 ntBASIC5.71□□□□□ -1.5
COPB1P53618 AC104849.1-201ENST00000462623 405 ntBASIC5.71□□□□□ -1.5
COPB1P53618 RN7SL51P-201ENST00000468230 285 ntBASIC5.71□□□□□ -1.5
COPB1P53618 AC135999.1-201ENST00000478962 479 ntBASIC5.71□□□□□ -1.5
COPB1P53618 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COPB1P53618 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.71□□□□□ -1.5
COPB1P53618 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.71□□□□□ -1.5
COPB1P53618 EEF1A1P37-201ENST00000522748 715 ntBASIC5.71□□□□□ -1.5
COPB1P53618 AC118942.1-201ENST00000529674 1035 ntBASIC5.71□□□□□ -1.5
COPB1P53618 AC027544.3-201ENST00000535082 757 ntBASIC5.71□□□□□ -1.5
COPB1P53618 LRRC34P1-201ENST00000542742 915 ntBASIC5.71□□□□□ -1.5
COPB1P53618 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.71□□□□□ -1.5
COPB1P53618 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.71□□□□□ -1.5
COPB1P53618 MTCO2P2-201ENST00000591258 225 ntBASIC5.71□□□□□ -1.5
COPB1P53618 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.71□□□□□ -1.5
COPB1P53618 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.71□□□□□ -1.5
COPB1P53618 AC097065.2-201ENST00000608159 533 ntBASIC5.71□□□□□ -1.5
COPB1P53618 AC087683.2-201ENST00000611384 326 ntBASIC5.71□□□□□ -1.5
COPB1P53618 AC022467.1-201ENST00000614738 749 ntBASIC5.71□□□□□ -1.5
COPB1P53618 AP000648.2-201ENST00000624182 404 ntBASIC5.71□□□□□ -1.5
COPB1P53618 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms