Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 AL121950.1-201ENST00000624993 2077 ntBASIC4.36□□□□□ -1.71
CX3CR1P49238 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CX3CR1P49238 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CX3CR1P49238 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CR1P49238 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CR1P49238 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.35□□□□□ -1.71
CX3CR1P49238 AC021242.1-201ENST00000507315 2035 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CX3CR1P49238 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CR1P49238 ATP5HP3-201ENST00000396994 486 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 MIR1286-201ENST00000408112 78 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 RN7SKP199-201ENST00000410325 305 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 TRIM60P17-201ENST00000415181 719 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CR1P49238 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CX3CR1P49238 IGHV5-78-201ENST00000450948 295 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AC243772.1-201ENST00000451620 410 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AC092647.2-201ENST00000452998 253 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CR1P49238 AL389915.2-201ENST00000454576 441 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 RPL31P53-201ENST00000457065 348 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 RPS17P2-201ENST00000461663 408 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 RN7SL799P-201ENST00000475891 298 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CR1P49238 LARP7P4-201ENST00000481075 878 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AC106872.4-201ENST00000510050 523 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 RNA5SP249-201ENST00000516127 99 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CR1P49238 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CR1P49238 AC005868.1-201ENST00000536421 331 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AC090022.1-201ENST00000546569 311 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CR1P49238 NMNAT1P1-201ENST00000554095 876 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AL049830.4-201ENST00000555149 351 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.35□□□□□ -1.71
CX3CR1P49238 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.35□□□□□ -1.71
CX3CR1P49238 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CR1P49238 AC105254.2-201ENST00000603636 436 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AC019131.2-201ENST00000609071 870 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CR1P49238 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AC019206.1-201ENST00000621938 425 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 AC243960.7-201ENST00000623532 707 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CR1P49238 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CX3CR1P49238 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.35□□□□□ -1.71
CX3CR1P49238 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CX3CR1P49238 BTBD10P1-201ENST00000549824 1352 ntBASIC4.35□□□□□ -1.71
CX3CR1P49238 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CX3CR1P49238 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CR1P49238 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CX3CR1P49238 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CR1P49238 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.34□□□□□ -1.71
CX3CR1P49238 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CX3CR1P49238 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CX3CR1P49238 MAPK10-286ENST00000641208 8747 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CR1P49238 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CX3CR1P49238 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CX3CR1P49238 RNA5SP435-201ENST00000364044 108 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 SNORA68.2-201ENST00000391263 128 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CX3CR1P49238 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.34□□□□□ -1.71
CX3CR1P49238 AP000534.2-201ENST00000412729 568 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CR1P49238 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.34□□□□□ -1.71
CX3CR1P49238 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CR1P49238 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CR1P49238 KNOP1P3-201ENST00000446933 426 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CR1P49238 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.34□□□□□ -1.71
CX3CR1P49238 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CR1P49238 RN7SL172P-201ENST00000460535 303 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 AC097484.1-201ENST00000471148 389 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 RPS18P6-201ENST00000476880 458 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.34□□□□□ -1.71
CX3CR1P49238 ENPP7P9-201ENST00000514456 627 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 RNA5SP464-201ENST00000516251 108 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.34□□□□□ -1.71
CX3CR1P49238 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.34□□□□□ -1.71
CX3CR1P49238 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.34□□□□□ -1.71
CX3CR1P49238 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.34□□□□□ -1.71
CX3CR1P49238 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CR1P49238 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.34□□□□□ -1.71
CX3CR1P49238 MIR4310-201ENST00000582950 57 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.34□□□□□ -1.71
CX3CR1P49238 AL049794.2-201ENST00000616301 365 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 MIR4302-201ENST00000638058 60 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CX3CR1P49238 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CX3CR1P49238 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.34□□□□□ -1.71
CX3CR1P49238 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CR1P49238 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CX3CR1P49238 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.34□□□□□ -1.71
CX3CR1P49238 ECM1P2-201ENST00000503354 1577 ntBASIC4.34□□□□□ -1.71
CX3CR1P49238 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CX3CR1P49238 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms