Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SNORA2.3-201ENST00000383920 135 ntBASIC4.59□□□□□ -1.67
RFC3P40938 RNA5SP241-201ENST00000391326 114 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AP002530.1-201ENST00000405705 684 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AL390316.1-201ENST00000406279 553 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AC098592.2-201ENST00000413158 265 ntBASIC4.59□□□□□ -1.67
RFC3P40938 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFC3P40938 TRGV7-201ENST00000427089 353 ntBASIC4.59□□□□□ -1.67
RFC3P40938 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RFC3P40938 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.59□□□□□ -1.67
RFC3P40938 AL450263.2-201ENST00000439400 589 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AC090804.1-201ENST00000448870 490 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AC063943.1-201ENST00000465434 453 ntBASIC4.59□□□□□ -1.67
RFC3P40938 RPL5P16-201ENST00000471467 790 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.59□□□□□ -1.67
RFC3P40938 AC007686.1-201ENST00000488511 463 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.59□□□□□ -1.67
RFC3P40938 RPS24P16-201ENST00000497294 392 ntBASIC4.59□□□□□ -1.67
RFC3P40938 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.59□□□□□ -1.67
RFC3P40938 IMPA1P1-201ENST00000510718 842 ntBASIC4.59□□□□□ -1.67
RFC3P40938 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.59□□□□□ -1.67
RFC3P40938 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.59□□□□□ -1.67
RFC3P40938 TRIM51GP-201ENST00000534741 1350 ntBASIC4.59□□□□□ -1.67
RFC3P40938 GCSHP4-201ENST00000538792 439 ntBASIC4.59□□□□□ -1.67
RFC3P40938 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.59□□□□□ -1.67
RFC3P40938 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFC3P40938 DUX4L52-201ENST00000549363 777 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AL358913.1-201ENST00000554342 121 ntBASIC4.59□□□□□ -1.67
RFC3P40938 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFC3P40938 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.59□□□□□ -1.67
RFC3P40938 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.59□□□□□ -1.67
RFC3P40938 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RFC3P40938 AC100778.3-201ENST00000580060 1750 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.59□□□□□ -1.67
RFC3P40938 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.59□□□□□ -1.67
RFC3P40938 AL353600.1-201ENST00000608148 251 ntBASIC4.59□□□□□ -1.67
RFC3P40938 AC233968.1-201ENST00000611212 1300 ntBASIC4.59□□□□□ -1.67
RFC3P40938 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.59□□□□□ -1.67
RFC3P40938 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.59□□□□□ -1.67
RFC3P40938 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.59□□□□□ -1.67
RFC3P40938 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFC3P40938 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.59□□□□□ -1.68
RFC3P40938 AC126323.6-202ENST00000568092 3511 ntBASIC4.59□□□□□ -1.68
RFC3P40938 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
RFC3P40938 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RFC3P40938 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.59□□□□□ -1.68
RFC3P40938 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.59□□□□□ -1.68
RFC3P40938 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.58□□□□□ -1.68
RFC3P40938 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
RFC3P40938 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
RFC3P40938 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.58□□□□□ -1.68
RFC3P40938 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 AP001273.1-201ENST00000624493 3152 ntBASIC4.58□□□□□ -1.68
RFC3P40938 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
RFC3P40938 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.58□□□□□ -1.68
RFC3P40938 AC017079.1-201ENST00000333650 415 ntBASIC4.58□□□□□ -1.68
RFC3P40938 RN7SKP149-201ENST00000363008 344 ntBASIC4.58□□□□□ -1.68
RFC3P40938 RNU6-1331P-201ENST00000363658 106 ntBASIC4.58□□□□□ -1.68
RFC3P40938 AC007618.1-201ENST00000366455 732 ntBASIC4.58□□□□□ -1.68
RFC3P40938 SNORA56-201ENST00000383966 129 ntBASIC4.58□□□□□ -1.68
RFC3P40938 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 RPL21P67-201ENST00000402896 478 ntBASIC4.58□□□□□ -1.68
RFC3P40938 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.58□□□□□ -1.68
RFC3P40938 RPL26P29-201ENST00000415623 438 ntBASIC4.58□□□□□ -1.68
RFC3P40938 RPA2P2-201ENST00000419698 796 ntBASIC4.58□□□□□ -1.68
RFC3P40938 RPL12P43-201ENST00000420608 499 ntBASIC4.58□□□□□ -1.68
RFC3P40938 AC106901.1-201ENST00000425086 698 ntBASIC4.58□□□□□ -1.68
RFC3P40938 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.58□□□□□ -1.68
RFC3P40938 NFYAP1-201ENST00000431953 972 ntBASIC4.58□□□□□ -1.68
RFC3P40938 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 PRPF38AP1-201ENST00000451976 933 ntBASIC4.58□□□□□ -1.68
RFC3P40938 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.58□□□□□ -1.68
RFC3P40938 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.58□□□□□ -1.68
RFC3P40938 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 AC016559.2-201ENST00000510759 359 ntBASIC4.58□□□□□ -1.68
RFC3P40938 AC138938.1-201ENST00000515431 782 ntBASIC4.58□□□□□ -1.68
RFC3P40938 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.58□□□□□ -1.68
RFC3P40938 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.58□□□□□ -1.68
RFC3P40938 EDDM3DP-201ENST00000554692 434 ntBASIC4.58□□□□□ -1.68
RFC3P40938 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.58□□□□□ -1.68
RFC3P40938 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.58□□□□□ -1.68
RFC3P40938 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.58□□□□□ -1.68
RFC3P40938 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.58□□□□□ -1.68
RFC3P40938 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.58□□□□□ -1.68
RFC3P40938 AL158062.1-201ENST00000619632 745 ntBASIC4.58□□□□□ -1.68
RFC3P40938 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.58□□□□□ -1.68
RFC3P40938 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.58□□□□□ -1.68
RFC3P40938 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 CASC19-204ENST00000641001 2055 ntBASIC4.58□□□□□ -1.68
RFC3P40938 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.58□□□□□ -1.68
RFC3P40938 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC3P40938 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFC3P40938 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC3P40938 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RFC3P40938 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms