Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.29□□□□□ -1.4
HOXC9P31274 AL133338.2-201ENST00000604292 736 ntBASIC6.29□□□□□ -1.4
HOXC9P31274 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.29□□□□□ -1.4
HOXC9P31274 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC9P31274 U3.53-201ENST00000628922 216 ntBASIC6.29□□□□□ -1.4
HOXC9P31274 AC006453.5-201ENST00000636451 619 ntBASIC6.29□□□□□ -1.4
HOXC9P31274 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.29□□□□□ -1.4
HOXC9P31274 CASC19-260ENST00000641828 2001 ntBASIC6.29□□□□□ -1.4
HOXC9P31274 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC9P31274 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
HOXC9P31274 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC9P31274 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC9P31274 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC9P31274 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HOXC9P31274 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
HOXC9P31274 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC9P31274 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC9P31274 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HOXC9P31274 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC9P31274 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
HOXC9P31274 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC9P31274 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
HOXC9P31274 NPM1P10-201ENST00000398310 865 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 AC007064.3-201ENST00000422608 359 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 BX119904.3-201ENST00000428194 957 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 KATNBL1P2-201ENST00000433311 835 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 H2AFZP5-201ENST00000446960 382 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 AC009963.2-201ENST00000453431 138 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 RN7SL41P-201ENST00000476144 297 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 RN7SKP21-201ENST00000516503 220 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC9P31274 AC005868.1-201ENST00000536421 331 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 TOMM20P2-201ENST00000540082 421 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC9P31274 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.28□□□□□ -1.4
HOXC9P31274 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HOXC9P31274 AC234775.3-201ENST00000564612 656 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 AC073137.1-201ENST00000605636 634 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 AL121890.3-201ENST00000618494 516 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC9P31274 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC9P31274 ZNF137P-201ENST00000456718 1920 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.28□□□□□ -1.4
HOXC9P31274 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HOXC9P31274 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HOXC9P31274 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.27□□□□□ -1.4
HOXC9P31274 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HOXC9P31274 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HOXC9P31274 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HOXC9P31274 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC9P31274 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC9P31274 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC9P31274 AC021146.4-201ENST00000309229 279 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 RNA5SP479-201ENST00000364858 117 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 RNU11-201ENST00000387069 134 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 ARL4AP5-201ENST00000404372 599 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC9P31274 AC013429.2-201ENST00000418798 781 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 AC004975.1-201ENST00000428733 208 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 AC013410.1-201ENST00000436223 1232 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 MRPL35P2-201ENST00000448009 511 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC9P31274 AL356981.1-201ENST00000454879 684 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 AC093166.2-201ENST00000455969 1017 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 PPIAP21-201ENST00000464473 501 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 OR11I1P-201ENST00000486033 954 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HOXC9P31274 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.27□□□□□ -1.41
HOXC9P31274 FKBP1BP1-201ENST00000553366 325 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC9P31274 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC9P31274 AC009303.3-201ENST00000591103 736 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 AC125494.2-201ENST00000602431 657 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 AL360012.1-201ENST00000602813 131 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 AC012409.3-201ENST00000611343 981 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 AL391597.1-201ENST00000618707 694 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC9P31274 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC9P31274 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HOXC9P31274 AC073342.2-201ENST00000595842 1800 ntBASIC6.27□□□□□ -1.41
HOXC9P31274 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC9P31274 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC9P31274 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC9P31274 AC092451.3-201ENST00000625067 1343 ntBASIC6.26□□□□□ -1.41
HOXC9P31274 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC9P31274 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC9P31274 CARF-203ENST00000414439 2099 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC9P31274 RNA5SP509-201ENST00000364577 119 ntBASIC6.26□□□□□ -1.41
HOXC9P31274 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXC9P31274 TRGV7-201ENST00000427089 353 ntBASIC6.26□□□□□ -1.41
HOXC9P31274 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC9P31274 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC9P31274 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC9P31274 AP002371.1-201ENST00000463604 433 ntBASIC6.26□□□□□ -1.41
HOXC9P31274 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC9P31274 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC9P31274 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC9P31274 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC9P31274 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms