Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC073091.2-201ENST00000603205 907 ntBASIC3.84□□□□□ -1.79
CCL3L1P16619 AC087283.1-201ENST00000604029 1074 ntBASIC3.84□□□□□ -1.79
CCL3L1P16619 AL161616.1-201ENST00000611867 286 ntBASIC3.84□□□□□ -1.79
CCL3L1P16619 MIR8069-1-201ENST00000616627 86 ntBASIC3.84□□□□□ -1.79
CCL3L1P16619 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.84□□□□□ -1.79
CCL3L1P16619 MIR8069-2-201ENST00000621412 86 ntBASIC3.84□□□□□ -1.79
CCL3L1P16619 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.84□□□□□ -1.79
CCL3L1P16619 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL3L1P16619 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCL3L1P16619 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL3L1P16619 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCL3L1P16619 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CCL3L1P16619 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CCL3L1P16619 AL031119.1-201ENST00000404707 1879 ntBASIC3.84□□□□□ -1.8
CCL3L1P16619 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL3L1P16619 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL3L1P16619 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL3L1P16619 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
CCL3L1P16619 ZFRP1-201ENST00000457579 2970 ntBASIC3.83□□□□□ -1.8
CCL3L1P16619 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL3L1P16619 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL3L1P16619 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL3L1P16619 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.83□□□□□ -1.8
CCL3L1P16619 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL3L1P16619 RN7SL354P-201ENST00000469282 294 ntBASIC3.83□□□□□ -1.8
CCL3L1P16619 AC104763.1-201ENST00000475274 360 ntBASIC3.83□□□□□ -1.8
CCL3L1P16619 AC069304.1-201ENST00000491593 704 ntBASIC3.83□□□□□ -1.8
CCL3L1P16619 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL3L1P16619 AC098799.3-201ENST00000506095 438 ntBASIC3.83□□□□□ -1.8
CCL3L1P16619 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL3L1P16619 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL3L1P16619 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.83□□□□□ -1.8
CCL3L1P16619 AC130352.1-201ENST00000602979 661 ntBASIC3.83□□□□□ -1.8
CCL3L1P16619 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.83□□□□□ -1.8
CCL3L1P16619 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.83□□□□□ -1.8
CCL3L1P16619 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL3L1P16619 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL3L1P16619 U3.53-201ENST00000628922 216 ntBASIC3.83□□□□□ -1.8
CCL3L1P16619 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL3L1P16619 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCL3L1P16619 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCL3L1P16619 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CCL3L1P16619 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL3L1P16619 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCL3L1P16619 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCL3L1P16619 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL3L1P16619 AL391684.1-202ENST00000641293 1636 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 AC108467.2-201ENST00000617640 1597 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCL3L1P16619 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL3L1P16619 AC073429.2-201ENST00000569694 1444 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC3.82□□□□□ -1.8
CCL3L1P16619 RN7SKP115-201ENST00000363177 317 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 SNORA71.2-201ENST00000364941 134 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 AC019050.1-201ENST00000418508 492 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL3L1P16619 AC104651.2-201ENST00000447549 528 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL3L1P16619 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL3L1P16619 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.82□□□□□ -1.8
CCL3L1P16619 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3.82□□□□□ -1.8
CCL3L1P16619 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.82□□□□□ -1.8
CCL3L1P16619 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC3.82□□□□□ -1.8
CCL3L1P16619 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL3L1P16619 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC3.82□□□□□ -1.8
CCL3L1P16619 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL3L1P16619 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL3L1P16619 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.82□□□□□ -1.8
CCL3L1P16619 AC008536.1-201ENST00000602872 669 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 AC116651.1-201ENST00000609724 556 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCL3L1P16619 AC139713.2-215ENST00000641428 5037 ntBASIC3.82□□□□□ -1.8
CCL3L1P16619 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CCL3L1P16619 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCL3L1P16619 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.82□□□□□ -1.8
CCL3L1P16619 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL3L1P16619 AL355852.1-201ENST00000454081 1771 ntBASIC3.81□□□□□ -1.8
CCL3L1P16619 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCL3L1P16619 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCL3L1P16619 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL3L1P16619 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCL3L1P16619 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCL3L1P16619 MIR585-201ENST00000384887 94 ntBASIC3.81□□□□□ -1.8
CCL3L1P16619 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCL3L1P16619 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCL3L1P16619 MIR937-201ENST00000401271 86 ntBASIC3.81□□□□□ -1.8
CCL3L1P16619 Z98745.1-201ENST00000402553 494 ntBASIC3.81□□□□□ -1.8
CCL3L1P16619 RNU2-50P-201ENST00000410494 143 ntBASIC3.81□□□□□ -1.8
CCL3L1P16619 NPM1P40-201ENST00000412758 733 ntBASIC3.81□□□□□ -1.8
CCL3L1P16619 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms