Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL138878.2-201ENST00000440581 1241 ntBASIC4.29□□□□□ -1.72
FREM3P0C091 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.29□□□□□ -1.72
FREM3P0C091 RN7SL517P-201ENST00000462240 305 ntBASIC4.29□□□□□ -1.72
FREM3P0C091 RPL5P22-201ENST00000480199 884 ntBASIC4.29□□□□□ -1.72
FREM3P0C091 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.29□□□□□ -1.72
FREM3P0C091 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.29□□□□□ -1.72
FREM3P0C091 IGKV1-32-201ENST00000519290 311 ntBASIC4.29□□□□□ -1.72
FREM3P0C091 BGLT3-201ENST00000564523 994 ntBASIC4.29□□□□□ -1.72
FREM3P0C091 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
FREM3P0C091 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FREM3P0C091 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.29□□□□□ -1.72
FREM3P0C091 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FREM3P0C091 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FREM3P0C091 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FREM3P0C091 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.29□□□□□ -1.72
FREM3P0C091 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FREM3P0C091 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
FREM3P0C091 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FREM3P0C091 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FREM3P0C091 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.28□□□□□ -1.72
FREM3P0C091 P2RY10P2-201ENST00000416730 913 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 RPS27AP7-201ENST00000422792 455 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 Z74021.1-201ENST00000423610 407 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.28□□□□□ -1.72
FREM3P0C091 OR52A4P-201ENST00000472867 958 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.28□□□□□ -1.72
FREM3P0C091 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.28□□□□□ -1.72
FREM3P0C091 DDX18P5-201ENST00000534547 1306 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FREM3P0C091 AL132640.2-201ENST00000559968 1698 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 AL121932.1-201ENST00000605542 214 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 AC022106.2-201ENST00000620114 757 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FREM3P0C091 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.28□□□□□ -1.72
FREM3P0C091 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FREM3P0C091 AL359922.3-201ENST00000624779 1670 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 AL391684.1-202ENST00000641293 1636 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
FREM3P0C091 MTHFD2P5-201ENST00000320415 844 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 AC017079.1-201ENST00000333650 415 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FREM3P0C091 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.28□□□□□ -1.72
FREM3P0C091 ATP5HP3-201ENST00000396994 486 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.28□□□□□ -1.72
FREM3P0C091 YWHAZP2-201ENST00000440317 728 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 AL450023.3-201ENST00000440592 271 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 RPL36AP15-201ENST00000444514 266 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.28□□□□□ -1.72
FREM3P0C091 PGBD4P4-201ENST00000509673 613 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.28□□□□□ -1.72
FREM3P0C091 RNU1-6P-201ENST00000516290 144 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 RAB9BP1-201ENST00000519581 626 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.28□□□□□ -1.72
FREM3P0C091 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.28□□□□□ -1.72
FREM3P0C091 SNORA74C-1-201ENST00000580726 201 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 ELOCP28-201ENST00000590044 317 ntBASIC4.28□□□□□ -1.72
FREM3P0C091 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.28□□□□□ -1.72
FREM3P0C091 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FREM3P0C091 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FREM3P0C091 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.28□□□□□ -1.72
FREM3P0C091 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
FREM3P0C091 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.27□□□□□ -1.73
FREM3P0C091 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FREM3P0C091 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.27□□□□□ -1.73
FREM3P0C091 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FREM3P0C091 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FREM3P0C091 RNA5SP332-201ENST00000391063 115 ntBASIC4.27□□□□□ -1.73
FREM3P0C091 VN1R37P-201ENST00000419096 748 ntBASIC4.27□□□□□ -1.73
FREM3P0C091 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.27□□□□□ -1.73
FREM3P0C091 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.27□□□□□ -1.73
FREM3P0C091 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.27□□□□□ -1.73
FREM3P0C091 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.27□□□□□ -1.73
FREM3P0C091 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.27□□□□□ -1.73
FREM3P0C091 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.27□□□□□ -1.73
FREM3P0C091 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.27□□□□□ -1.73
FREM3P0C091 MIR3936-201ENST00000584304 110 ntBASIC4.27□□□□□ -1.73
FREM3P0C091 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
FREM3P0C091 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
FREM3P0C091 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
FREM3P0C091 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.27□□□□□ -1.73
FREM3P0C091 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FREM3P0C091 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.27□□□□□ -1.73
FREM3P0C091 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.27□□□□□ -1.73
FREM3P0C091 RNU2-50P-201ENST00000410494 143 ntBASIC4.27□□□□□ -1.73
FREM3P0C091 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.27□□□□□ -1.73
FREM3P0C091 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.27□□□□□ -1.73
FREM3P0C091 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.27□□□□□ -1.73
FREM3P0C091 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.27□□□□□ -1.73
FREM3P0C091 NDUFA12P1-201ENST00000455914 406 ntBASIC4.27□□□□□ -1.73
FREM3P0C091 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.27□□□□□ -1.73
FREM3P0C091 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.27□□□□□ -1.73
FREM3P0C091 RN7SKP92-201ENST00000517266 244 ntBASIC4.27□□□□□ -1.73
FREM3P0C091 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.27□□□□□ -1.73
FREM3P0C091 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.27□□□□□ -1.73
FREM3P0C091 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FREM3P0C091 AC010435.1-201ENST00000623353 1177 ntBASIC4.27□□□□□ -1.73
FREM3P0C091 STX3-208ENST00000641815 3236 ntBASIC4.27□□□□□ -1.73
FREM3P0C091 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms