Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 OR13Z1P-201ENST00000416141 834 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 BX510359.3-201ENST00000422168 306 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.56□□□□□ -1.68
SFTPBP07988 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.56□□□□□ -1.68
SFTPBP07988 AL672138.1-201ENST00000450604 1015 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 HMGB1P4-201ENST00000455362 567 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 RNU7-27P-201ENST00000459281 62 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.56□□□□□ -1.68
SFTPBP07988 RPL5P22-201ENST00000480199 884 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AC116562.1-201ENST00000485355 781 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
SFTPBP07988 RPL15P21-201ENST00000495592 567 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 RN7SL591P-201ENST00000496150 292 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AC090638.1-201ENST00000498296 909 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.56□□□□□ -1.68
SFTPBP07988 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.56□□□□□ -1.68
SFTPBP07988 AC108120.2-201ENST00000512973 294 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.56□□□□□ -1.68
SFTPBP07988 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.56□□□□□ -1.68
SFTPBP07988 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.56□□□□□ -1.68
SFTPBP07988 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 AP004607.2-201ENST00000533949 322 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AC008083.2-201ENST00000546707 476 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.56□□□□□ -1.68
SFTPBP07988 RN7SL356P-201ENST00000582228 248 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.56□□□□□ -1.68
SFTPBP07988 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.56□□□□□ -1.68
SFTPBP07988 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.56□□□□□ -1.68
SFTPBP07988 AC009027.1-201ENST00000604510 479 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.56□□□□□ -1.68
SFTPBP07988 AC109583.2-201ENST00000617367 129 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.56□□□□□ -1.68
SFTPBP07988 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.56□□□□□ -1.68
SFTPBP07988 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SFTPBP07988 AL731532.2-201ENST00000623542 1953 ntBASIC4.56□□□□□ -1.68
SFTPBP07988 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SFTPBP07988 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.55□□□□□ -1.68
SFTPBP07988 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SFTPBP07988 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 OR9G4-201ENST00000302957 984 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 RNU1-19P-201ENST00000363306 165 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 RNU1-77P-201ENST00000390868 162 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 RPS27AP11-201ENST00000402798 447 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 UBE2V1P15-201ENST00000407776 448 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 RPL12P9-201ENST00000412942 488 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.55□□□□□ -1.68
SFTPBP07988 SRSF1P1-201ENST00000424058 520 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.55□□□□□ -1.68
SFTPBP07988 RPL34P6-201ENST00000432390 345 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 GSTM5P1-201ENST00000434751 660 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.55□□□□□ -1.68
SFTPBP07988 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.55□□□□□ -1.68
SFTPBP07988 PRPF38AP1-201ENST00000451976 933 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.55□□□□□ -1.68
SFTPBP07988 EIF1P7-201ENST00000487533 337 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.55□□□□□ -1.68
SFTPBP07988 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.55□□□□□ -1.68
SFTPBP07988 AC098799.1-201ENST00000504752 800 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.55□□□□□ -1.68
SFTPBP07988 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.55□□□□□ -1.68
SFTPBP07988 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.55□□□□□ -1.68
SFTPBP07988 AC016559.2-201ENST00000510759 359 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 MTND2P31-201ENST00000512602 616 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.55□□□□□ -1.68
SFTPBP07988 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.55□□□□□ -1.68
SFTPBP07988 RNU6-347P-201ENST00000516658 105 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 SCARNA16.4-201ENST00000516956 187 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.55□□□□□ -1.68
SFTPBP07988 AC004923.2-201ENST00000529649 369 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.55□□□□□ -1.68
SFTPBP07988 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.55□□□□□ -1.68
SFTPBP07988 AC068714.1-201ENST00000559623 800 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.55□□□□□ -1.68
SFTPBP07988 MTCYBP13-201ENST00000578634 1093 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 AC233702.9-201ENST00000581528 203 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 FKBP1AP1-201ENST00000594588 318 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 AL021707.7-201ENST00000607991 416 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SFTPBP07988 AP002967.1-201ENST00000624203 539 ntBASIC4.55□□□□□ -1.68
SFTPBP07988 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.55□□□□□ -1.68
SFTPBP07988 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms