Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TIMP1P01033 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 RN7SKP17-201ENST00000411242 351 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 BMS1P19-201ENST00000433925 393 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 AC097523.2-201ENST00000435551 652 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 AC013410.1-201ENST00000436223 1232 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.22□□□□□ -1.57
TIMP1P01033 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.22□□□□□ -1.57
TIMP1P01033 FHP1-201ENST00000442741 703 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.22□□□□□ -1.57
TIMP1P01033 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 RN7SL197P-201ENST00000466981 299 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.22□□□□□ -1.57
TIMP1P01033 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 RPSAP51-201ENST00000497462 645 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.22□□□□□ -1.57
TIMP1P01033 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.22□□□□□ -1.57
TIMP1P01033 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.22□□□□□ -1.57
TIMP1P01033 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.22□□□□□ -1.57
TIMP1P01033 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.22□□□□□ -1.57
TIMP1P01033 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.22□□□□□ -1.57
TIMP1P01033 AC114781.5-201ENST00000615297 108 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TIMP1P01033 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.22□□□□□ -1.57
TIMP1P01033 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.22□□□□□ -1.57
TIMP1P01033 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 TLK1P1-201ENST00000456760 2440 ntBASIC5.22□□□□□ -1.57
TIMP1P01033 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
TIMP1P01033 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TIMP1P01033 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
TIMP1P01033 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TIMP1P01033 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TIMP1P01033 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
TIMP1P01033 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TIMP1P01033 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.21□□□□□ -1.58
TIMP1P01033 AL442128.2-201ENST00000620246 1824 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TIMP1P01033 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.21□□□□□ -1.58
TIMP1P01033 SNORA73.1-201ENST00000363107 205 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TIMP1P01033 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.21□□□□□ -1.58
TIMP1P01033 RAD23BP1-201ENST00000421404 1227 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AL356387.2-201ENST00000422272 243 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 RPL7P57-201ENST00000423238 740 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 RPS17P8-201ENST00000434525 335 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.21□□□□□ -1.58
TIMP1P01033 NUTF2P3-201ENST00000448540 384 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 RN7SL303P-201ENST00000469773 251 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AC135999.1-201ENST00000478962 479 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.21□□□□□ -1.58
TIMP1P01033 RNU6-1334P-201ENST00000516032 105 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 MIR2116-201ENST00000517221 80 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TIMP1P01033 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.21□□□□□ -1.58
TIMP1P01033 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.21□□□□□ -1.58
TIMP1P01033 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TIMP1P01033 AC034105.4-201ENST00000568304 277 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AC011477.5-201ENST00000586571 259 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AL133338.2-201ENST00000604292 736 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AC090948.1-201ENST00000607464 549 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AC012409.3-201ENST00000611343 981 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AL133243.1-201ENST00000614487 366 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.21□□□□□ -1.58
TIMP1P01033 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.21□□□□□ -1.58
TIMP1P01033 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
TIMP1P01033 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TIMP1P01033 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TIMP1P01033 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.21□□□□□ -1.58
TIMP1P01033 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TIMP1P01033 AL122126.1-201ENST00000546905 1318 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 AL355834.1-201ENST00000556602 3965 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 SAMMSON-210ENST00000641260 1308 ntBASIC5.21□□□□□ -1.58
TIMP1P01033 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TIMP1P01033 AC025031.4-201ENST00000621248 3271 ntBASIC5.2□□□□□ -1.58
TIMP1P01033 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
TIMP1P01033 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TIMP1P01033 AC007618.1-201ENST00000366455 732 ntBASIC5.2□□□□□ -1.58
TIMP1P01033 RNU1-82P-201ENST00000390851 165 ntBASIC5.2□□□□□ -1.58
TIMP1P01033 RPL32P23-201ENST00000397237 405 ntBASIC5.2□□□□□ -1.58
TIMP1P01033 AMZ2P2-201ENST00000406819 1057 ntBASIC5.2□□□□□ -1.58
TIMP1P01033 NDUFA5P1-201ENST00000433858 341 ntBASIC5.2□□□□□ -1.58
TIMP1P01033 AC138761.5-201ENST00000433967 325 ntBASIC5.2□□□□□ -1.58
TIMP1P01033 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.2□□□□□ -1.58
TIMP1P01033 GAPDHP14-201ENST00000450472 937 ntBASIC5.2□□□□□ -1.58
TIMP1P01033 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.2□□□□□ -1.58
TIMP1P01033 AC128716.1-201ENST00000475129 166 ntBASIC5.2□□□□□ -1.58
TIMP1P01033 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.2□□□□□ -1.58
TIMP1P01033 AC026688.1-201ENST00000520639 1168 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms