Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
NKX2-2O95096 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.94□□□□□ -1.62
NKX2-2O95096 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NKX2-2O95096 AC097063.1-201ENST00000426714 1797 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-2O95096 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 SNORA62.2-201ENST00000364672 152 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 SNORA5.1-201ENST00000384275 131 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 RNA5SP339-201ENST00000390987 122 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 HSPA8P15-201ENST00000401676 786 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-2O95096 VN1R51P-201ENST00000411675 945 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AL390774.1-201ENST00000411924 246 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-2O95096 AL513325.1-201ENST00000417716 1034 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 DPPA2P2-201ENST00000418220 897 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 PTP4A1P7-201ENST00000423476 514 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-2O95096 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-2O95096 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-2O95096 AC011242.1-201ENST00000433596 1158 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 AC090018.1-201ENST00000434369 367 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-2O95096 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.93□□□□□ -1.62
NKX2-2O95096 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 RPS11P7-201ENST00000442125 465 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-2O95096 GAPDHP14-201ENST00000450472 937 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.93□□□□□ -1.62
NKX2-2O95096 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 GTF2IP12-201ENST00000456547 356 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-2O95096 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-2O95096 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-2O95096 AL133445.1-201ENST00000467051 452 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AC117394.1-201ENST00000477323 567 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 RPL7P40-201ENST00000481703 745 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-2O95096 RN7SL184P-201ENST00000488308 297 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AL136038.1-201ENST00000497246 351 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.93□□□□□ -1.62
NKX2-2O95096 TPT1P8-201ENST00000510120 555 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.93□□□□□ -1.62
NKX2-2O95096 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NKX2-2O95096 AC025260.1-201ENST00000548858 430 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AC126177.5-201ENST00000549599 178 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.93□□□□□ -1.62
NKX2-2O95096 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 RN7SL622P-201ENST00000585292 275 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-2O95096 AC090525.3-201ENST00000605601 189 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AP002802.2-201ENST00000605877 235 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 MIR7973-1-201ENST00000614683 76 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 MIR6839-201ENST00000620425 113 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 AC074101.1-201ENST00000637861 241 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 AL121839.2-201ENST00000565058 6943 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.93□□□□□ -1.62
NKX2-2O95096 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NKX2-2O95096 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
NKX2-2O95096 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.93□□□□□ -1.62
NKX2-2O95096 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.93□□□□□ -1.62
NKX2-2O95096 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-2O95096 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NKX2-2O95096 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-2O95096 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-2O95096 ZNF849P-201ENST00000594711 1566 ntBASIC4.92□□□□□ -1.62
NKX2-2O95096 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-2O95096 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.92□□□□□ -1.62
NKX2-2O95096 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-2O95096 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NKX2-2O95096 MIR323A-201ENST00000362199 86 ntBASIC4.92□□□□□ -1.62
NKX2-2O95096 RNA5SP27-201ENST00000363839 119 ntBASIC4.92□□□□□ -1.62
NKX2-2O95096 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NKX2-2O95096 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.92□□□□□ -1.62
NKX2-2O95096 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NKX2-2O95096 RNU1-77P-201ENST00000390868 162 ntBASIC4.92□□□□□ -1.62
NKX2-2O95096 RPL23AP59-201ENST00000399415 461 ntBASIC4.92□□□□□ -1.62
NKX2-2O95096 AC009804.1-201ENST00000400949 179 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms