Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS4BO75351 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS4BO75351 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS4BO75351 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
VPS4BO75351 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
VPS4BO75351 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VPS4BO75351 OR9K1P-201ENST00000326513 941 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 RNA5SP443-201ENST00000363083 132 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 U3.23-201ENST00000391132 200 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS4BO75351 MCTS2P-201ENST00000394552 546 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
VPS4BO75351 RPL23AP59-201ENST00000399415 461 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 HMGB1P13-201ENST00000406019 642 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 AC245060.4-201ENST00000413293 1121 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS4BO75351 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS4BO75351 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS4BO75351 HSPE1P16-201ENST00000426640 348 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS4BO75351 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS4BO75351 AL445466.1-201ENST00000448432 357 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 AC244505.3-201ENST00000454598 187 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS4BO75351 AC004129.2-201ENST00000457229 287 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 PRDX3P4-201ENST00000470828 747 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS4BO75351 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS4BO75351 RNU6-1308P-201ENST00000516817 103 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS4BO75351 OR4A43P-201ENST00000532938 908 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS4BO75351 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS4BO75351 ZNF321P-202ENST00000550843 495 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS4BO75351 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.63□□□□□ -1.51
VPS4BO75351 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.63□□□□□ -1.51
VPS4BO75351 MTND4LP24-201ENST00000572277 291 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 AC005244.1-201ENST00000582566 339 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.63□□□□□ -1.51
VPS4BO75351 COX6CP7-201ENST00000597056 208 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 AL589674.2-201ENST00000604304 337 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.63□□□□□ -1.51
VPS4BO75351 AL691477.1-201ENST00000624398 162 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VPS4BO75351 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS4BO75351 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS4BO75351 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS4BO75351 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS4BO75351 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS4BO75351 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VPS4BO75351 CASC19-281ENST00000642118 1554 ntBASIC5.63□□□□□ -1.51
VPS4BO75351 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VPS4BO75351 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS4BO75351 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
VPS4BO75351 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.62□□□□□ -1.51
VPS4BO75351 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VPS4BO75351 RNU1-19P-201ENST00000363306 165 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 RN7SKP160-201ENST00000363804 340 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS4BO75351 RNU4-31P-201ENST00000384211 141 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 Y_RNA.472-201ENST00000384322 102 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 SNORD116-12-201ENST00000384468 92 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 OR2AT2P-201ENST00000413438 905 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AL590806.1-201ENST00000415818 853 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 RPS4XP16-201ENST00000427198 791 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 NDUFS5P5-201ENST00000437256 321 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AC097499.1-201ENST00000444277 208 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 RPS23P9-201ENST00000448848 438 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS4BO75351 AC098583.1-201ENST00000480875 255 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 RN7SL193P-201ENST00000491708 276 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 CDH12P2-201ENST00000504393 298 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS4BO75351 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS4BO75351 AC119751.1-201ENST00000513357 765 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS4BO75351 Y_RNA.688-201ENST00000516565 95 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 CYCSP22-201ENST00000517555 339 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AP006245.2-201ENST00000522004 300 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.62□□□□□ -1.51
VPS4BO75351 OR5AM1P-201ENST00000532136 1032 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS4BO75351 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS4BO75351 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 AC006518.2-201ENST00000542513 940 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.62□□□□□ -1.51
VPS4BO75351 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VPS4BO75351 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.62□□□□□ -1.51
VPS4BO75351 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.62□□□□□ -1.51
VPS4BO75351 AC007786.3-201ENST00000615154 596 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AC073569.3-201ENST00000619055 682 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AC013470.4-201ENST00000619978 986 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 AC078883.4-201ENST00000623218 367 ntBASIC5.62□□□□□ -1.51
VPS4BO75351 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms