Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 AL078621.3-201ENST00000623707 2042 ntBASIC5.82□□□□□ -1.48
FOXN3O00409 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.82□□□□□ -1.48
FOXN3O00409 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
FOXN3O00409 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
FOXN3O00409 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXN3O00409 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 OR9K1P-202ENST00000641111 3217 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXN3O00409 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXN3O00409 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 AL035419.1-201ENST00000397037 564 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 DBIP1-201ENST00000401435 260 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 AC013404.1-201ENST00000413068 249 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 HMGB3P31-201ENST00000413333 595 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 TNPO1P1-201ENST00000423641 1138 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXN3O00409 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 AC092447.2-201ENST00000435487 669 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 AL390119.1-201ENST00000440329 312 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 MTCO1P53-201ENST00000441633 699 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 AP000281.1-201ENST00000444036 316 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 RPL31P44-201ENST00000447680 377 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXN3O00409 AC114322.1-201ENST00000506771 926 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXN3O00409 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXN3O00409 MTND2P32-201ENST00000521584 1038 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXN3O00409 AC090888.3-201ENST00000558917 509 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXN3O00409 NPM1P47-201ENST00000560843 856 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXN3O00409 MIR1273E-201ENST00000581165 102 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXN3O00409 AC096586.1-201ENST00000610267 561 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 AC244107.2-201ENST00000611773 76 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 RN7SL787P-201ENST00000613000 284 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 CYCSP41-201ENST00000616920 296 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 AC138907.10-201ENST00000623708 983 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXN3O00409 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXN3O00409 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXN3O00409 GTF2H2B-203ENST00000508065 1432 ntBASIC5.81□□□□□ -1.48
FOXN3O00409 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXN3O00409 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXN3O00409 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
FOXN3O00409 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 ZNF849P-201ENST00000594711 1566 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXN3O00409 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
FOXN3O00409 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 MIR1282-201ENST00000408865 101 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AL449283.1-202ENST00000418249 604 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC009506.2-201ENST00000420635 840 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 SRSF1P1-201ENST00000424058 520 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC002069.1-201ENST00000429649 1159 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXN3O00409 FTH1P16-201ENST00000435241 552 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC090804.1-201ENST00000448870 490 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXN3O00409 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXN3O00409 GTF2IP12-201ENST00000456547 356 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC092754.1-201ENST00000472975 479 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXN3O00409 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXN3O00409 AC111193.1-201ENST00000504097 155 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXN3O00409 HMGB1P1-201ENST00000522557 636 ntBASIC5.8□□□□□ -1.48
FOXN3O00409 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms