Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC28A1O00337 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC28A1O00337 PGAM1P13-201ENST00000507497 754 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 AC005868.1-201ENST00000536421 331 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC28A1O00337 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 AL133247.2-201ENST00000603236 482 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC28A1O00337 AC004808.2-201ENST00000627965 773 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 CASC19-264ENST00000641912 1184 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SLC28A1O00337 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SLC28A1O00337 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC28A1O00337 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC28A1O00337 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SLC28A1O00337 ZNF652P1-201ENST00000442420 1309 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC28A1O00337 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SLC28A1O00337 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 RNU1-43P-201ENST00000365052 165 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SLC28A1O00337 ATP5HP3-201ENST00000396994 486 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 SNORA11.5-201ENST00000408163 128 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 TMBIM7P-201ENST00000418074 855 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 CYCSP11-201ENST00000436426 315 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC245517.2-201ENST00000442890 346 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AL031584.1-201ENST00000447169 754 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 AC022431.1-201ENST00000450941 438 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 RNA5SP103-201ENST00000459503 118 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.82□□□□□ -1.64
SLC28A1O00337 OR2AO1P-201ENST00000476497 403 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
SLC28A1O00337 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC28A1O00337 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC012339.2-201ENST00000523996 453 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.82□□□□□ -1.64
SLC28A1O00337 FKBP1AP1-201ENST00000594588 318 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 TAS2R6P-201ENST00000605022 826 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AL118508.4-201ENST00000624142 1176 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.82□□□□□ -1.64
SLC28A1O00337 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
SLC28A1O00337 AC027228.2-201ENST00000567141 2154 ntBASIC4.82□□□□□ -1.64
SLC28A1O00337 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SLC28A1O00337 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SLC28A1O00337 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SLC28A1O00337 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 MAPK10-320ENST00000641462 6696 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 MIR323A-201ENST00000362199 86 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 RNU4-39P-201ENST00000362455 127 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 RNA5SP242-201ENST00000364171 118 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SLC28A1O00337 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SLC28A1O00337 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.81□□□□□ -1.64
SLC28A1O00337 OR3A2-201ENST00000408891 1076 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.81□□□□□ -1.64
SLC28A1O00337 SLC35E1P1-201ENST00000419313 864 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.81□□□□□ -1.64
SLC28A1O00337 RPL34P6-201ENST00000432390 345 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 AC092162.1-201ENST00000432828 434 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 RSL24D1P8-201ENST00000434442 492 ntBASIC4.81□□□□□ -1.64
SLC28A1O00337 MTND2P2-201ENST00000434633 945 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms