Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1AO00322 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1AO00322 OR10D4P-201ENST00000525892 951 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 MORF4L1P3-201ENST00000525966 950 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 AC008033.2-201ENST00000542626 177 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1AO00322 GSTP1P1-201ENST00000548078 319 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1AO00322 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1AO00322 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1AO00322 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1AO00322 AC130352.1-201ENST00000602979 661 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 AL121932.1-201ENST00000605542 214 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 AC007497.1-201ENST00000610421 561 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 CR381572.2-201ENST00000624852 397 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
UPK1AO00322 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1AO00322 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1AO00322 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1AO00322 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1AO00322 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.52□□□□□ -1.69
UPK1AO00322 SMG1P6-201ENST00000532337 2930 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1AO00322 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1AO00322 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1AO00322 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.51□□□□□ -1.69
UPK1AO00322 INTS6P1-201ENST00000504674 2530 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1AO00322 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.51□□□□□ -1.69
UPK1AO00322 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
UPK1AO00322 MTCO1P46-201ENST00000451639 1491 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AC116158.1-201ENST00000560231 2129 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1AO00322 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1AO00322 EOGT-210ENST00000615922 1931 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.51□□□□□ -1.69
UPK1AO00322 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1AO00322 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1AO00322 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1AO00322 RPL12P43-201ENST00000420608 499 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1AO00322 RPS17P8-201ENST00000434525 335 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 PPIAP13-201ENST00000434706 478 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AL451139.1-201ENST00000434718 346 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 PRPF38AP2-201ENST00000438179 851 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 SLC25A18P1-201ENST00000449385 454 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AC104971.1-201ENST00000495117 578 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1AO00322 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.51□□□□□ -1.69
UPK1AO00322 OR5M14P-201ENST00000506803 618 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1AO00322 BTF3P13-201ENST00000513224 490 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1AO00322 OR5AZ1P-201ENST00000527448 943 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.51□□□□□ -1.69
UPK1AO00322 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.51□□□□□ -1.69
UPK1AO00322 ATP5J2P6-201ENST00000565203 266 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1AO00322 AC005520.3-201ENST00000602874 370 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 COX6CP4-201ENST00000605798 228 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AC026979.4-201ENST00000606555 645 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 AC018445.2-201ENST00000622987 260 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.51□□□□□ -1.69
UPK1AO00322 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1AO00322 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1AO00322 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UPK1AO00322 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
UPK1AO00322 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
UPK1AO00322 AC017104.4-201ENST00000636283 1592 ntBASIC4.51□□□□□ -1.69
UPK1AO00322 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.51□□□□□ -1.69
UPK1AO00322 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPK1AO00322 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPK1AO00322 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
UPK1AO00322 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPK1AO00322 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPK1AO00322 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.5□□□□□ -1.69
UPK1AO00322 TLK1P1-201ENST00000456760 2440 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPK1AO00322 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPK1AO00322 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UPK1AO00322 CYCSP10-201ENST00000417973 294 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 LINC00993-201ENST00000420453 540 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 OR2AM1P-201ENST00000422137 422 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 RPL7P57-201ENST00000423238 740 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.5□□□□□ -1.69
UPK1AO00322 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.5□□□□□ -1.69
UPK1AO00322 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UPK1AO00322 PSMD10P3-201ENST00000437000 448 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
UPK1AO00322 AC234781.3-201ENST00000452540 973 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 ATP5G1P3-201ENST00000463301 410 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.5□□□□□ -1.69
UPK1AO00322 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.5□□□□□ -1.69
UPK1AO00322 AC004453.1-201ENST00000487895 408 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 GAPDHP56-201ENST00000506031 988 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 HMGB1P19-201ENST00000517578 577 ntBASIC4.5□□□□□ -1.69
UPK1AO00322 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.5□□□□□ -1.69
UPK1AO00322 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.5□□□□□ -1.69
UPK1AO00322 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms