Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 OR7M1P-201ENST00000608946 533 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AP000864.1-201ENST00000609424 650 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AC007497.1-201ENST00000610421 561 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 MIR6826-201ENST00000617808 98 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AL355852.1-201ENST00000454081 1771 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM49D1C9J1S8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM49D1C9J1S8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.71□□□□□ -1.65
TRIM49D1C9J1S8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 RN7SKP104-201ENST00000362605 328 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 RNA5SP372-201ENST00000390836 115 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 RNU1-82P-201ENST00000390851 165 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 CEACAMP8-201ENST00000413902 580 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 GLUD1P9-201ENST00000420997 1173 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 FTLP19-201ENST00000433300 394 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 SEPT14P1-201ENST00000458703 648 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 RN7SL177P-201ENST00000476596 299 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC079841.1-201ENST00000481228 950 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC004980.4-201ENST00000513375 203 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC133555.2-201ENST00000550213 292 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC004825.1-201ENST00000555068 586 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 RN7SL52P-201ENST00000584271 284 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC020910.3-201ENST00000603701 874 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC091979.2-201ENST00000607514 214 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AL353600.1-201ENST00000608148 251 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 CR381572.2-201ENST00000624852 397 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 PABPC1P6-201ENST00000445594 1829 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 AL031119.1-201ENST00000404707 1879 ntBASIC4.71□□□□□ -1.66
TRIM49D1C9J1S8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 U3.30-201ENST00000391308 210 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AP002530.1-201ENST00000405705 684 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 HDGFP1-201ENST00000405943 252 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 VDAC1P9-201ENST00000412766 841 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 GTF3AP1-201ENST00000416942 1004 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 SLC25A18P1-201ENST00000449385 454 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AC234781.3-201ENST00000452540 973 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 COPS8P2-201ENST00000473228 627 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AC140172.1-201ENST00000502928 141 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AC138409.2-202ENST00000507274 458 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AC022726.1-201ENST00000587475 207 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AL139041.1-201ENST00000605480 610 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 AP001521.2-201ENST00000608772 546 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 RARSP1-201ENST00000542842 1418 ntBASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM49D1C9J1S8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 CASC19-204ENST00000641001 2055 ntBASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM49D1C9J1S8 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms