Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRAV27A0A087WT01 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRAV27A0A087WT01 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
TRAV27A0A087WT01 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TRAV27A0A087WT01 HSPD1P14-201ENST00000432666 1618 ntBASIC4.21□□□□□ -1.73
TRAV27A0A087WT01 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 INTS6P1-201ENST00000504674 2530 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 MIR195-201ENST00000385194 87 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 RPL21P43-201ENST00000425440 472 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 OR52J1P-201ENST00000450596 932 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 RN7SL346P-201ENST00000491561 294 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC093763.2-201ENST00000505334 1223 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC147055.3-201ENST00000510547 851 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 IGLV2-28-201ENST00000520681 304 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC021006.3-201ENST00000530771 192 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC008033.2-201ENST00000542626 177 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AC140113.4-201ENST00000622087 222 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 AP001002.1-201ENST00000625148 1513 ntBASIC4.21□□□□□ -1.74
TRAV27A0A087WT01 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 RNA5SP191-201ENST00000362585 102 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 MIR921-201ENST00000401133 56 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AL356390.1-201ENST00000455684 397 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AC091544.1-201ENST00000484702 348 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 RN7SL629P-201ENST00000489622 285 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 DEFB109F-201ENST00000491870 277 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 RN7SL808P-201ENST00000496066 299 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AP001880.2-201ENST00000538233 448 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 HMGN2P6-201ENST00000551091 273 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 ATP5J2P6-201ENST00000565203 266 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AC011487.3-201ENST00000593607 453 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AL445222.1-201ENST00000607259 628 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AC004232.3-201ENST00000622977 525 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 AC109780.1-201ENST00000451768 1344 ntBASIC4.2□□□□□ -1.74
TRAV27A0A087WT01 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 RN7SKP115-201ENST00000363177 317 ntBASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 RN7SKP199-201ENST00000410325 305 ntBASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 DPPA2P3-201ENST00000411853 655 ntBASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 RSU1P3-201ENST00000412878 835 ntBASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 SEPT7P8-201ENST00000413308 775 ntBASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.19□□□□□ -1.74
TRAV27A0A087WT01 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms