Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC245517.2-201ENST00000442890 346 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 MTND2P3-201ENST00000452458 470 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 RPL10P17-201ENST00000453852 316 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AP002345.1-201ENST00000456493 928 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 RN7SL423P-201ENST00000486202 304 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 FABP5P6-201ENST00000510588 409 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AC012400.1-201ENST00000518452 381 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AC122688.1-201ENST00000541494 223 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 KATNBL1P1-201ENST00000605192 748 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 AC092747.4-201ENST00000620519 1861 ntBASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA1Q9Y5H4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 MIR421-201ENST00000365696 85 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 SNORA5.1-201ENST00000384275 131 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 TRGV6-201ENST00000417928 299 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 FAM204CP-201ENST00000424489 642 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 RPL7P56-201ENST00000429441 717 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 RSL24D1P8-201ENST00000434442 492 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC114878.1-201ENST00000441166 358 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AL353898.1-201ENST00000444055 238 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC023512.1-201ENST00000444513 499 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 KNOP1P3-201ENST00000446933 426 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC079168.1-201ENST00000458741 345 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 snoU13.20-201ENST00000459180 104 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 OR52A4P-202ENST00000481634 799 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC135068.12-201ENST00000637370 931 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 AC004076.2-201ENST00000620532 3323 ntBASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA1Q9Y5H4 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AC017002.4-201ENST00000604721 1525 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AL589826.1-201ENST00000340697 249 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 BMS1P3-201ENST00000372011 932 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 RNA5SP498-201ENST00000411342 120 ntBASIC5.09□□□□□ -1.59
PCDHGA1Q9Y5H4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms