Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 SPATA2P1-201ENST00000431223 2055 ntBASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RHBDD3Q9Y3P4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC123912.3-201ENST00000600907 1367 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 U3.2-201ENST00000362981 210 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 RNU1-43P-201ENST00000365052 165 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 MT-TP-201ENST00000387461 68 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 NUDT19P3-201ENST00000404698 555 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC013429.2-201ENST00000418798 781 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 SCAND3P1-201ENST00000439854 1060 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 RPS17P2-201ENST00000461663 408 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC091180.1-201ENST00000462104 372 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 OR2AO1P-201ENST00000476497 403 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 UBA52P7-201ENST00000486088 380 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC106872.4-201ENST00000510050 523 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 IGHV3-63-201ENST00000518422 341 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC018552.3-201ENST00000567416 561 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 RN7SL435P-201ENST00000584418 282 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC090527.3-201ENST00000619041 548 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 AC083843.3-201ENST00000623679 2186 ntBASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.41□□□□□ -1.7
RHBDD3Q9Y3P4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 BRAFP1-201ENST00000445336 2703 ntBASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RHBDD3Q9Y3P4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 RNA5SP435-201ENST00000364044 108 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AL359643.1-201ENST00000404109 423 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 RN7SKP206-201ENST00000410823 293 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 SLC35E1P1-201ENST00000419313 864 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 MTCYBP7-201ENST00000419540 1134 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 ARAFP1-201ENST00000422172 605 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 CCRL1P1-201ENST00000449542 1053 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC009127.1-201ENST00000467090 155 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 RN7SL441P-201ENST00000492388 296 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC024558.1-201ENST00000505008 528 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 HMGB3P16-201ENST00000508037 287 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 ENPP7P9-201ENST00000514456 627 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC024940.3-201ENST00000538551 316 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC068446.3-201ENST00000555285 382 ntBASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.4□□□□□ -1.71
RHBDD3Q9Y3P4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms