Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 AC123904.2-201ENST00000548059 300 ntBASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 RPLP1-205ENST00000560274 256 ntTSL 3 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 AC123788.2-201ENST00000612290 283 ntBASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 FAM74A6-203ENST00000615956 481 ntBASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 Metazoa_SRP.192-201ENST00000616260 286 ntBASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
VPS9D1Q9Y2B5 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 Y_RNA.29-201ENST00000362570 113 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 RNU1-115P-201ENST00000365329 160 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 Y_RNA.464-201ENST00000384282 110 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 Y_RNA.478-201ENST00000384358 107 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 Y_RNA.562-201ENST00000384695 113 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 MT-TW-201ENST00000387382 68 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 NDUFS5P1-201ENST00000405668 289 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AL034372.1-201ENST00000407586 754 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC002367.1-201ENST00000416765 405 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 CHIAP3-201ENST00000423668 1133 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 MED28P3-201ENST00000444288 531 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 RN7SL791P-201ENST00000467868 295 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 CREM-226ENST00000469949 721 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 RPL12P31-201ENST00000478433 450 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 NDUFS5P2-201ENST00000484004 306 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 PABPC1P1-201ENST00000506347 591 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 BTG4P1-201ENST00000510421 183 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 NTAN1P2-201ENST00000515730 940 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 IGHVII-22-1-201ENST00000517888 265 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 IGHV3-63-201ENST00000518422 341 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 IGLVI-70-201ENST00000523272 390 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AP000857.1-201ENST00000532151 543 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC092868.1-201ENST00000557949 802 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 DNM1P34-202ENST00000567850 315 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 MIR4437-201ENST00000581331 60 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC011447.2-201ENST00000592921 283 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC006557.5-201ENST00000603126 811 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC140658.6-201ENST00000603958 201 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC063962.1-201ENST00000608199 521 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AL451054.3-201ENST00000611115 776 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC143336.1-201ENST00000614164 836 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 ELMO2P1-202ENST00000614283 794 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC074029.3-201ENST00000618623 312 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC091953.2-201ENST00000623979 160 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC012100.3-201ENST00000624738 575 ntBASIC7.78□□□□□ -1.16
VPS9D1Q9Y2B5 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms