Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 U3.25-201ENST00000391209 220 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 RN7SKP59-201ENST00000410520 314 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AL513174.1-201ENST00000423182 629 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 DSTNP5-201ENST00000427921 523 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 IGLV3-4-201ENST00000432300 244 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 PA2G4P6-201ENST00000438325 1197 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AL450263.2-201ENST00000439400 589 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 KRTAP8-2P-201ENST00000440620 186 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AC007677.1-201ENST00000445757 515 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 RNF138P1-201ENST00000502765 546 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 DUTP7-201ENST00000507982 486 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 BTG4P1-201ENST00000510421 183 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 PTGES3P3-201ENST00000511479 482 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 RNA5SP418-201ENST00000515951 117 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 RNU6-358P-201ENST00000516564 75 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 MIR3913-1-201ENST00000577744 102 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 Six3os1_4.1-201ENST00000615706 324 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 U1.41-201ENST00000617626 165 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 U1.34-201ENST00000618578 162 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 LINC02035-201ENST00000610128 5476 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 CASC19-243ENST00000641588 1546 ntBASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
ZC3H4Q9UPT8 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RNU5D-1-201ENST00000363299 116 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 SNORA63-201ENST00000363450 132 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RNA5SP88-201ENST00000365560 109 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 Y_RNA.402-201ENST00000383972 102 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 EEF1A1P40-201ENST00000412883 573 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL663061.1-201ENST00000416625 580 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL359092.1-201ENST00000417156 265 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RPL21P111-201ENST00000418453 477 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 PRUNEP1-201ENST00000425846 705 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL831737.1-201ENST00000441288 271 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL645936.1-201ENST00000441979 518 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 SNORD42A-201ENST00000459584 64 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 RN7SL717P-201ENST00000478343 297 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 CDH12P2-201ENST00000504393 298 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC114786.4-201ENST00000508771 728 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC091133.4-201ENST00000511142 308 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 LRRC34P2-201ENST00000514850 553 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 MTCO1P35-201ENST00000515270 228 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 OR5AQ1P-201ENST00000527596 927 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AP003115.1-201ENST00000569849 463 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL390838.2-201ENST00000602394 274 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 AL139089.1-201ENST00000620372 975 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 MIR6730-201ENST00000622213 67 ntBASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC8.03□□□□□ -1.12
ZC3H4Q9UPT8 MAPK10-323ENST00000641493 3207 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms