Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
MACF1Q9UPN3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC1.9□□□□□ -2.1
MACF1Q9UPN3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
MACF1Q9UPN3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.1
MACF1Q9UPN3 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
MACF1Q9UPN3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
MACF1Q9UPN3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
MACF1Q9UPN3 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
MACF1Q9UPN3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC1.9□□□□□ -2.1
MACF1Q9UPN3 ATP5A1P4-201ENST00000556888 1605 ntBASIC1.9□□□□□ -2.1
MACF1Q9UPN3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 RNF19BPX-201ENST00000426224 625 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC079922.1-201ENST00000443291 359 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 RPS20P21-201ENST00000466859 343 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 RN7SL323P-201ENST00000494712 295 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AL121932.1-201ENST00000605542 214 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 CADM2-201ENST00000383699 9488 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AL359195.2-201ENST00000623657 4412 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 RNA5SP267-201ENST00000364893 126 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC006023.1-201ENST00000603944 259 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AP005432.1-201ENST00000580891 3485 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 U3.10-201ENST00000364459 214 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 SNORA77-201ENST00000408716 125 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC025750.2-201ENST00000442609 450 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 EEF1A1P25-201ENST00000495704 1267 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC008833.1-201ENST00000611633 691 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC244107.2-201ENST00000611773 76 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 OR14L1P-202ENST00000641545 3009 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AC023274.2-201ENST00000445264 521 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 HIGD1AP18-201ENST00000520730 278 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AP001160.4-201ENST00000596971 382 ntBASIC1.9□□□□□ -2.11
MACF1Q9UPN3 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC1.9□□□□□ -2.11
MACF1Q9UPN3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 H2AFZP5-201ENST00000446960 382 ntBASIC1.89□□□□□ -2.11
MACF1Q9UPN3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 MIR5699-201ENST00000578903 90 ntBASIC1.89□□□□□ -2.11
MACF1Q9UPN3 RPL12P50-201ENST00000603116 116 ntBASIC1.89□□□□□ -2.11
MACF1Q9UPN3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MACF1Q9UPN3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms