Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COPS3Q9UNS2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COPS3Q9UNS2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
COPS3Q9UNS2 AC015813.6-201ENST00000624409 5808 ntBASIC4.46□□□□□ -1.7
COPS3Q9UNS2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
COPS3Q9UNS2 PANDAR-201ENST00000629595 1506 ntBASIC4.46□□□□□ -1.7
COPS3Q9UNS2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 DDX18P3-201ENST00000404856 2007 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 SCARNA15-201ENST00000607520 4325 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 RNU4-23P-201ENST00000362839 140 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 RNA5SP28-201ENST00000363841 119 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 RN7SKP113-201ENST00000363891 295 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 RNA5SP435-201ENST00000364044 108 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 RNU6-729P-201ENST00000384399 107 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 MIR600-201ENST00000385007 98 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AL031985.1-201ENST00000392713 418 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC009804.1-201ENST00000400949 179 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 SNORA77-201ENST00000408716 125 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 QRSL1P2-201ENST00000418582 964 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC013470.3-201ENST00000420252 1194 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC093655.2-201ENST00000425735 631 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 GYG1P1-201ENST00000460864 698 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 LARP7P4-201ENST00000481075 878 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC090686.1-201ENST00000481577 749 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 RN7SL184P-201ENST00000488308 297 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 OR9N1P-201ENST00000491296 333 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 MTATP6P1-201ENST00000514057 681 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 RNU6-319P-201ENST00000516025 108 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 SEC11B-201ENST00000518383 499 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC012339.2-201ENST00000523996 453 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 CYCSP40-201ENST00000575927 294 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AL137072.1-201ENST00000603444 466 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 SNORD91B-202ENST00000608459 222 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AL356274.1-201ENST00000617064 410 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 RMST_5.1-201ENST00000618704 126 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC090527.3-201ENST00000619041 548 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 AC026124.2-201ENST00000621847 656 ntBASIC4.45□□□□□ -1.7
COPS3Q9UNS2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPS3Q9UNS2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AC018529.3-201ENST00000624212 2254 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 U3.2-201ENST00000362981 210 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 RNU6-618P-201ENST00000363518 112 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 RNA5SP105-201ENST00000391123 113 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 SNORA17A-201ENST00000391185 133 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 SNORA68.2-201ENST00000391263 128 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 DHFRP5-201ENST00000406944 564 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 TMBIM7P-201ENST00000418074 855 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 RPS26P4-201ENST00000431743 355 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 HMGB3P10-201ENST00000434734 572 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AC073052.1-201ENST00000440417 714 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AC144530.1-201ENST00000452862 555 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 HMGB1P4-201ENST00000455362 567 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 RN7SL799P-201ENST00000475891 298 ntBASIC4.44□□□□□ -1.7
COPS3Q9UNS2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.44□□□□□ -1.7
COPS3Q9UNS2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms