Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 RNA5SP130-201ENST00000364431 114 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AL157884.3-201ENST00000448273 1184 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 snoU13.29-201ENST00000459370 104 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC023632.4-201ENST00000517783 191 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC026403.1-201ENST00000518938 295 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 RNU4-89P-201ENST00000607443 133 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC020634.1-201ENST00000608701 549 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 FAM91A3P-201ENST00000456826 2544 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AL035079.1-201ENST00000405210 287 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC007389.2-201ENST00000434630 306 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC027667.1-201ENST00000545814 304 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 AC007179.3-201ENST00000604976 235 ntBASIC4.76□□□□□ -1.65
CHD7Q9P2D1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 RN7SL132P-201ENST00000478131 296 ntBASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AC020890.1-201ENST00000491837 504 ntBASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AC040958.1-201ENST00000561102 201 ntBASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AL352984.2-202ENST00000613699 155 ntBASIC4.75□□□□□ -1.65
CHD7Q9P2D1 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AC073342.2-201ENST00000595842 1800 ntBASIC4.75□□□□□ -1.65
CHD7Q9P2D1 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 CYCSP10-201ENST00000417973 294 ntBASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 ARAFP2-201ENST00000440565 559 ntBASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 BPIFA4P-203ENST00000603168 689 ntBASIC4.75□□□□□ -1.65
CHD7Q9P2D1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AL672167.1-205ENST00000641112 3080 ntBASIC4.75□□□□□ -1.65
CHD7Q9P2D1 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD7Q9P2D1 AP000756.2-201ENST00000624168 2567 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AP000580.1-201ENST00000404439 358 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 MRPL50P1-201ENST00000431951 384 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC090142.1-201ENST00000465776 462 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 CPHL1P-201ENST00000461341 3407 ntBASIC4.74□□□□□ -1.65
CHD7Q9P2D1 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CHD7Q9P2D1 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms