Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AGGF1P9-201ENST00000561884 913 ntBASIC4.59□□□□□ -1.67
CCDC88CQ9P219 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 AL133338.2-201ENST00000604292 736 ntBASIC4.59□□□□□ -1.67
CCDC88CQ9P219 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
CCDC88CQ9P219 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CCDC88CQ9P219 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.59□□□□□ -1.68
CCDC88CQ9P219 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC88CQ9P219 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.59□□□□□ -1.68
CCDC88CQ9P219 AC112198.2-201ENST00000426589 6996 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC079741.1-201ENST00000321498 212 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AL357515.1-201ENST00000402967 542 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 P2RY10P2-201ENST00000416730 913 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 Z74021.1-201ENST00000423610 407 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 RPL35AP21-201ENST00000437667 333 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC005154.2-201ENST00000438110 379 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AL772161.1-201ENST00000439130 476 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 ARL2BPP10-201ENST00000446487 531 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC090142.2-201ENST00000483263 416 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 RN7SL244P-201ENST00000493405 297 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 OR2A3P-201ENST00000493774 953 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC023424.1-201ENST00000496058 459 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 USP9YP2-201ENST00000504503 1000 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 HMGB3P16-201ENST00000508037 287 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC002456.2-201ENST00000509356 380 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 USP9YP1-201ENST00000513521 1002 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 RN7SKP260-201ENST00000516907 149 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 RPL23AP53-201ENST00000521854 457 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AL110118.1-201ENST00000553543 400 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 EDDM3DP-201ENST00000554692 434 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 MIR378J-201ENST00000611988 109 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AP000346.3-201ENST00000622821 210 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 TLK1P1-201ENST00000456760 2440 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 SALL4P2-201ENST00000423288 2910 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 RN7SKP114-201ENST00000410327 279 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC068287.1-201ENST00000430283 295 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 AC011815.3-201ENST00000624194 473 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 SOCS5P3-201ENST00000425115 1576 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 NEAT1-202ENST00000501122 22743 ntBASIC4.58□□□□□ -1.68
CCDC88CQ9P219 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC88CQ9P219 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 SDAD1P1-202ENST00000524156 2051 ntBASIC4.57□□□□□ -1.68
CCDC88CQ9P219 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 RNA5SP249-201ENST00000516127 99 ntBASIC4.57□□□□□ -1.68
CCDC88CQ9P219 AC008147.3-201ENST00000548666 354 ntBASIC4.57□□□□□ -1.68
CCDC88CQ9P219 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 AL442639.1-201ENST00000625030 1899 ntBASIC4.57□□□□□ -1.68
CCDC88CQ9P219 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC88CQ9P219 AL022393.1-201ENST00000625142 1677 ntBASIC4.57□□□□□ -1.68
CCDC88CQ9P219 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms