Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SSU72Q9NP77 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SSU72Q9NP77 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC093909.5-201ENST00000621839 1799 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 RPL21P132-201ENST00000331267 462 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 RNA5SP321-201ENST00000362722 111 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 RNU5D-1-201ENST00000363299 116 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 RN7SKP189-201ENST00000365042 330 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 MT-TL1-201ENST00000386347 75 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 RPS3AP23-201ENST00000401762 784 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 MTCYBP36-201ENST00000404146 440 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 RN7SKP151-201ENST00000410230 316 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 RN7SKP268-201ENST00000411107 316 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC092647.1-201ENST00000420654 287 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 Z93242.1-201ENST00000427102 353 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC016027.5-201ENST00000427227 210 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 AL512649.1-201ENST00000428997 581 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC073614.1-201ENST00000438690 650 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 SNX18P9-201ENST00000440580 835 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC244505.5-201ENST00000443639 207 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC090013.1-201ENST00000485147 480 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 MTCYBP18-201ENST00000501056 747 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 MTCO2P30-201ENST00000503662 364 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC138866.2-201ENST00000508650 584 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 NACAP5-201ENST00000509863 636 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 GUSBP9-201ENST00000510138 584 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 OR51A1P-201ENST00000511110 946 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC025465.4-201ENST00000513422 638 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 CYP4F27P-201ENST00000514557 494 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 GTF2IP8-201ENST00000560687 584 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 MIR1273F-201ENST00000580581 99 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 GLYATL1P2-202ENST00000588046 902 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC005084.1-201ENST00000605160 304 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 LRRC77P-213ENST00000637727 880 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC116667.2-201ENST00000641075 823 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC093297.3-201ENST00000607056 2517 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC005725.1-201ENST00000577346 2607 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 AC092111.2-201ENST00000611627 1414 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SSU72Q9NP77 Z99496.1-201ENST00000469424 1477 ntBASIC6.41□□□□□ -1.38
SSU72Q9NP77 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.41□□□□□ -1.38
SSU72Q9NP77 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 TTC41P-205ENST00000551270 3963 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.4□□□□□ -1.38
SSU72Q9NP77 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SSU72Q9NP77 CBX3P1-201ENST00000325243 554 ntBASIC6.4□□□□□ -1.38
SSU72Q9NP77 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms