Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ADAM5-202ENST00000399789 1942 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 AL034549.2-201ENST00000618285 3373 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 AL121950.1-201ENST00000624993 2077 ntBASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM9SF3Q9HD45 SMG1P6-201ENST00000532337 2930 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC007996.1-201ENST00000620414 2821 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 RN7SKP114-201ENST00000410327 279 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 RNU2-50P-201ENST00000410494 143 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 SETP15-201ENST00000412724 337 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC017019.1-201ENST00000426129 261 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC008072.1-201ENST00000434254 824 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 RAB28P3-201ENST00000448325 597 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 MORF4L1P4-201ENST00000450245 976 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 PRPF38AP1-201ENST00000451976 933 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 TPT1P1-201ENST00000458495 518 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 IGBP1P4-201ENST00000503202 879 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 OR8X1P-201ENST00000534542 869 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 BNIP3P1-201ENST00000547295 580 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC063949.1-201ENST00000552900 865 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 SETP1-201ENST00000556014 845 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC011270.1-201ENST00000558606 583 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC008814.1-201ENST00000603797 406 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AL592494.3-201ENST00000609485 464 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 AC104623.2-202ENST00000623477 4002 ntBASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TM9SF3Q9HD45 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 UGT2B26P-201ENST00000508672 1613 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC005332.5-201ENST00000591222 2919 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 RN7SKP247-201ENST00000411094 308 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 PRPF38AP2-201ENST00000438179 851 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 RPL34P20-201ENST00000442771 351 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC009220.1-201ENST00000451614 275 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 RN7SL738P-201ENST00000470264 297 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC037198.2-201ENST00000478845 733 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC140172.1-201ENST00000502928 141 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 OR51K1P-201ENST00000510214 950 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 IMPA1P1-201ENST00000510718 842 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 BTF3P13-201ENST00000513224 490 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 HMGN1P9-201ENST00000515212 298 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC021006.3-201ENST00000530771 192 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 OR7E128P-201ENST00000532736 1024 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC027369.5-201ENST00000533838 755 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms