Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL049830.4-201ENST00000555149 351 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 MIR4760-201ENST00000585040 80 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC234771.5-201ENST00000600161 514 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AL627230.1-201ENST00000613077 211 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC011472.4-201ENST00000615848 491 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AL591926.8-201ENST00000616876 211 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC126544.2-201ENST00000625174 749 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC073869.8-201ENST00000641806 335 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AL353796.1-201ENST00000561542 3241 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 AC026951.1-201ENST00000559530 2459 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 MFSD8-213ENST00000641134 1327 ntBASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.49□□□□□ -1.37
RTFDC1Q9BY42 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC092747.4-201ENST00000620519 1861 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 MIR105-1-201ENST00000385222 81 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AL136131.1-201ENST00000406079 803 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 SNORA79B-201ENST00000410557 148 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 OR2AM1P-201ENST00000422137 422 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC093422.3-201ENST00000428506 305 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 BX679664.2-201ENST00000439282 283 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC097499.1-201ENST00000444277 208 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 TPT1P13-201ENST00000449760 499 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 PSMC1P13-201ENST00000458195 985 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 RN7SL738P-201ENST00000470264 297 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 OR11H3P-201ENST00000554547 982 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 EDDM3DP-201ENST00000554692 434 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AL109741.3-201ENST00000561748 592 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 CD24P2-201ENST00000565486 219 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC087283.1-201ENST00000604029 1074 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC005252.1-201ENST00000604518 1063 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 OR7A19P-201ENST00000608051 733 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC135068.5-201ENST00000624197 983 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AP003485.1-201ENST00000625093 753 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC132825.7-201ENST00000638744 335 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 AC114774.1-201ENST00000507410 1770 ntBASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.48□□□□□ -1.37
RTFDC1Q9BY42 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 MTCO1P15-201ENST00000529569 1526 ntBASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 RN7SKP95-201ENST00000362860 303 ntBASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 RNU6-481P-201ENST00000384194 107 ntBASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 MIR600-201ENST00000385007 98 ntBASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 AP000357.1-201ENST00000409926 1165 ntBASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 AC105402.1-201ENST00000413336 545 ntBASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 HYALP1-201ENST00000417674 1279 ntBASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 AC005189.1-201ENST00000431286 310 ntBASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 AL138878.2-201ENST00000440581 1241 ntBASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.47□□□□□ -1.37
RTFDC1Q9BY42 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms