Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RN7SKP115-201ENST00000363177 317 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 VDAC2P1-201ENST00000399358 958 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 SNORA79B-201ENST00000410557 148 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 LINC00993-201ENST00000420453 540 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AL451139.1-201ENST00000434718 346 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 RPL7AP6-201ENST00000477943 801 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AC116562.1-201ENST00000485355 781 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AC093890.1-201ENST00000502554 540 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 BTF3P13-201ENST00000513224 490 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 RN7SKP147-201ENST00000517154 244 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 OR5AZ1P-201ENST00000527448 943 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 MIR4646-201ENST00000580775 63 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AC130352.1-201ENST00000602979 661 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 AL353662.3-201ENST00000625131 237 ntBASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RSPO3Q9BXY4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 AL445487.1-201ENST00000415694 1580 ntBASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 XKRY2-202ENST00000623874 1581 ntBASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 XKRY-202ENST00000624960 1581 ntBASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 AC099654.2-201ENST00000433031 1980 ntBASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 AC021242.1-201ENST00000507315 2035 ntBASIC4.4□□□□□ -1.7
RSPO3Q9BXY4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RNA5SP305-201ENST00000362665 119 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RNU4-4P-201ENST00000364588 130 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RNA5SP151-201ENST00000365632 117 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AL590762.2-201ENST00000395798 571 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AL645733.1-201ENST00000402250 217 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RN7SKP167-201ENST00000411047 285 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC012519.1-201ENST00000424588 610 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 OR2B7P-201ENST00000429302 934 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 CYCSP11-201ENST00000436426 315 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RPL12P3-201ENST00000440080 396 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RN7SL860P-201ENST00000473738 223 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RN7SL591P-201ENST00000496150 292 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC140172.1-201ENST00000502928 141 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RN7SKP66-201ENST00000516681 231 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AL358913.1-201ENST00000554342 121 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC079075.1-201ENST00000559543 878 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AP000919.1-201ENST00000582850 985 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC022726.1-201ENST00000587475 207 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC005520.3-201ENST00000602874 370 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AL445222.1-201ENST00000607259 628 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC019206.1-201ENST00000621938 425 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC012414.7-202ENST00000622705 1090 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC016542.2-201ENST00000624201 619 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 AC131971.1-201ENST00000332881 1482 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 IRF5P1-201ENST00000504852 2164 ntBASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
RSPO3Q9BXY4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms