Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 Z98755.1-201ENST00000407015 1384 ntBASIC6.79□□□□□ -1.32
SIN3AQ96ST3 AC007342.9-201ENST00000623877 1385 ntBASIC6.79□□□□□ -1.32
SIN3AQ96ST3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SIN3AQ96ST3 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC021146.4-201ENST00000309229 279 ntBASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC079741.1-201ENST00000321498 212 ntBASIC6.78□□□□□ -1.32
SIN3AQ96ST3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC016831.4-201ENST00000438302 307 ntBASIC6.78□□□□□ -1.32
SIN3AQ96ST3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AP006289.1-201ENST00000538089 277 ntBASIC6.78□□□□□ -1.32
SIN3AQ96ST3 BNIP3P1-201ENST00000547295 580 ntBASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC130352.1-201ENST00000602979 661 ntBASIC6.78□□□□□ -1.32
SIN3AQ96ST3 AC020658.4-201ENST00000613987 684 ntBASIC6.78□□□□□ -1.32
SIN3AQ96ST3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SIN3AQ96ST3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AP000580.1-201ENST00000404439 358 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AL080315.1-201ENST00000406055 466 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 NFYAP1-201ENST00000431953 972 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AC007016.1-201ENST00000512110 244 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 RN7SL690P-201ENST00000582087 240 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AC008536.1-201ENST00000602872 669 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AL161616.1-201ENST00000611867 286 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AP005212.4-201ENST00000614206 710 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 MIR6780A-201ENST00000615089 68 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 AC010266.2-201ENST00000564741 3255 ntBASIC6.77□□□□□ -1.33
SIN3AQ96ST3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SIN3AQ96ST3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 DHX9P1-201ENST00000436565 3076 ntBASIC6.76□□□□□ -1.33
SIN3AQ96ST3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 AC240504.1-201ENST00000395709 845 ntBASIC6.76□□□□□ -1.33
SIN3AQ96ST3 RPL36AP10-201ENST00000421785 322 ntBASIC6.76□□□□□ -1.33
SIN3AQ96ST3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 ARL4AP4-201ENST00000434170 518 ntBASIC6.76□□□□□ -1.33
SIN3AQ96ST3 AL359265.2-201ENST00000434367 631 ntBASIC6.76□□□□□ -1.33
SIN3AQ96ST3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 AC073264.2-201ENST00000448886 166 ntBASIC6.76□□□□□ -1.33
SIN3AQ96ST3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 AC138965.3-201ENST00000623875 498 ntBASIC6.76□□□□□ -1.33
SIN3AQ96ST3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 AL138820.1-201ENST00000617901 5305 ntBASIC6.76□□□□□ -1.33
SIN3AQ96ST3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 KARSP3-201ENST00000571212 1504 ntBASIC6.76□□□□□ -1.33
SIN3AQ96ST3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
SIN3AQ96ST3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SIN3AQ96ST3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SIN3AQ96ST3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SIN3AQ96ST3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SIN3AQ96ST3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SIN3AQ96ST3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SIN3AQ96ST3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms