Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
GAFA1Q96PS6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.9□□□□□ -1.79
GAFA1Q96PS6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.9□□□□□ -1.79
GAFA1Q96PS6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
GAFA1Q96PS6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
GAFA1Q96PS6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
GAFA1Q96PS6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.9□□□□□ -1.79
GAFA1Q96PS6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
GAFA1Q96PS6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.9□□□□□ -1.79
GAFA1Q96PS6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 TCP11X1-202ENST00000622971 1372 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 RNU1-83P-201ENST00000363426 164 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 MIR298-201ENST00000401212 88 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 RBMY2KP-201ENST00000418221 992 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 USP9YP9-201ENST00000429406 715 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AL031584.1-201ENST00000447169 754 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 ATP5A1P7-201ENST00000453978 1279 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 CYCSP34-201ENST00000458172 304 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 IGKV1-32-201ENST00000519290 311 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 OR5M2P-201ENST00000529003 936 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AC008147.3-201ENST00000548666 354 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 MIR4270-201ENST00000581799 70 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AC130352.1-201ENST00000602979 661 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AC073091.2-201ENST00000603205 907 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 AL731566.1-201ENST00000620490 1937 ntBASIC3.89□□□□□ -1.79
GAFA1Q96PS6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.89□□□□□ -1.79
GAFA1Q96PS6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 PEX12P1-201ENST00000400284 1048 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 NPM1P40-201ENST00000412758 733 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 EIF4A1P1-201ENST00000420241 934 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 AC023424.1-201ENST00000496058 459 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 AC098799.3-201ENST00000506095 438 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 OR8A2P-201ENST00000528631 952 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 AC015912.2-201ENST00000571053 181 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 AC119674.1-217ENST00000641942 1086 ntBASIC3.88□□□□□ -1.79
GAFA1Q96PS6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC3.88□□□□□ -1.79
GAFA1Q96PS6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.87□□□□□ -1.79
GAFA1Q96PS6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GAFA1Q96PS6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
GAFA1Q96PS6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
GAFA1Q96PS6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.87□□□□□ -1.79
GAFA1Q96PS6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GAFA1Q96PS6 RN7SKP115-201ENST00000363177 317 ntBASIC3.87□□□□□ -1.79
GAFA1Q96PS6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
GAFA1Q96PS6 Z98745.1-201ENST00000402553 494 ntBASIC3.87□□□□□ -1.79
GAFA1Q96PS6 RN7SKP106-201ENST00000410832 272 ntBASIC3.87□□□□□ -1.79
GAFA1Q96PS6 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms