Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL662874.1-201ENST00000426065 230 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 HIGD1AP12-201ENST00000427832 281 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 HMGB3P10-201ENST00000434734 572 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 NANOGP2-201ENST00000435391 727 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL353093.1-201ENST00000441292 436 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL161636.2-201ENST00000445179 927 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 RPS27AP2-201ENST00000457576 465 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 PSMC1P13-201ENST00000458195 985 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 RN7SL101P-201ENST00000496350 279 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC104109.1-201ENST00000498563 436 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 GLUD1P3-202ENST00000508551 200 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 SNORA43.3-201ENST00000517240 103 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 PMS2P3-207ENST00000529061 717 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC091057.2-201ENST00000602594 792 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 VN1R74P-201ENST00000613259 503 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC011472.4-201ENST00000615848 491 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC126175.1-201ENST00000617041 758 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC017037.3-201ENST00000625016 472 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL355480.1-201ENST00000629041 99 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC068137.4-201ENST00000638485 296 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 LINC01808-202ENST00000641680 1116 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 LINC02211-204ENST00000642024 1070 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AC003973.3-201ENST00000624863 2822 ntBASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.25□□□□□ -1.57
CTHRC1Q96CG8 AL591135.1-201ENST00000401578 5914 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RNA5SP46-201ENST00000362370 120 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RN7SKP69-201ENST00000365390 305 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RN7SKP81-201ENST00000365603 331 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RNU11-201ENST00000387069 134 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 HMGB3P18-201ENST00000406327 590 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RN7SKP206-201ENST00000410823 293 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC007161.1-204ENST00000423039 460 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 CHEK2P5-201ENST00000423877 246 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC006335.2-201ENST00000437993 330 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 HMGN1P36-201ENST00000446623 298 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RPL23AP37-201ENST00000479658 549 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC104108.1-201ENST00000509930 412 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC092593.2-201ENST00000513866 913 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC025260.1-201ENST00000548858 430 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 AC023813.2-201ENST00000564321 469 ntBASIC5.24□□□□□ -1.57
CTHRC1Q96CG8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms