Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
TOPBP1Q92547 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
TOPBP1Q92547 RNU1-132P-201ENST00000364300 164 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 SDHCP2-201ENST00000398565 501 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 E2F6P2-201ENST00000420708 748 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 RPS7P7-201ENST00000463499 571 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC090142.1-201ENST00000465776 462 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 AC039056.2-201ENST00000622261 511 ntBASIC7.78□□□□□ -1.16
TOPBP1Q92547 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
TOPBP1Q92547 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
TOPBP1Q92547 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TOPBP1Q92547 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
TOPBP1Q92547 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 AL121950.1-201ENST00000624993 2077 ntBASIC7.77□□□□□ -1.17
TOPBP1Q92547 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
TOPBP1Q92547 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 SNORA71.3-201ENST00000362582 128 ntBASIC7.77□□□□□ -1.17
TOPBP1Q92547 RNA5SP283-201ENST00000365604 119 ntBASIC7.77□□□□□ -1.17
TOPBP1Q92547 TRAV35-201ENST00000390462 330 ntBASIC7.77□□□□□ -1.17
TOPBP1Q92547 H3F3BP1-201ENST00000440551 403 ntBASIC7.77□□□□□ -1.17
TOPBP1Q92547 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 RN7SL691P-201ENST00000494487 301 ntBASIC7.77□□□□□ -1.17
TOPBP1Q92547 AC016559.2-201ENST00000510759 359 ntBASIC7.77□□□□□ -1.17
TOPBP1Q92547 AC109635.6-201ENST00000525487 1113 ntBASIC7.77□□□□□ -1.17
TOPBP1Q92547 AC093388.1-201ENST00000609166 430 ntBASIC7.77□□□□□ -1.17
TOPBP1Q92547 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
TOPBP1Q92547 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
TOPBP1Q92547 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
TOPBP1Q92547 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
TOPBP1Q92547 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
TOPBP1Q92547 OR5P1P-201ENST00000299512 925 ntBASIC7.76□□□□□ -1.17
TOPBP1Q92547 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 RNU6-761P-201ENST00000384148 107 ntBASIC7.76□□□□□ -1.17
TOPBP1Q92547 YY1P1-201ENST00000427625 668 ntBASIC7.76□□□□□ -1.17
TOPBP1Q92547 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 AL133372.1-201ENST00000493565 745 ntBASIC7.76□□□□□ -1.17
TOPBP1Q92547 AC108064.1-201ENST00000513791 460 ntBASIC7.76□□□□□ -1.17
TOPBP1Q92547 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 AP005901.4-201ENST00000577336 569 ntBASIC7.76□□□□□ -1.17
TOPBP1Q92547 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
TOPBP1Q92547 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TOPBP1Q92547 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC7.75□□□□□ -1.17
TOPBP1Q92547 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
TOPBP1Q92547 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TOPBP1Q92547 LARP1BP1-201ENST00000506036 1359 ntBASIC7.75□□□□□ -1.17
TOPBP1Q92547 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TOPBP1Q92547 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.75□□□□□ -1.17
TOPBP1Q92547 AL161909.1-201ENST00000397390 712 ntBASIC7.75□□□□□ -1.17
TOPBP1Q92547 EIF4A1P3-201ENST00000411521 244 ntBASIC7.75□□□□□ -1.17
TOPBP1Q92547 RPL21P89-201ENST00000444021 467 ntBASIC7.75□□□□□ -1.17
TOPBP1Q92547 VN1R34P-201ENST00000447387 883 ntBASIC7.75□□□□□ -1.17
TOPBP1Q92547 AC053481.1-201ENST00000467217 306 ntBASIC7.75□□□□□ -1.17
TOPBP1Q92547 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.75□□□□□ -1.17
TOPBP1Q92547 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.75□□□□□ -1.17
TOPBP1Q92547 RNU4ATAC18P-201ENST00000516179 126 ntBASIC7.75□□□□□ -1.17
TOPBP1Q92547 AC023632.4-201ENST00000517783 191 ntBASIC7.75□□□□□ -1.17
TOPBP1Q92547 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC7.75□□□□□ -1.17
TOPBP1Q92547 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
TOPBP1Q92547 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
TOPBP1Q92547 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.75□□□□□ -1.17
TOPBP1Q92547 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
TOPBP1Q92547 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
TOPBP1Q92547 AP005432.1-201ENST00000580891 3485 ntBASIC7.75□□□□□ -1.17
TOPBP1Q92547 AC018628.1-201ENST00000624147 3819 ntBASIC7.74□□□□□ -1.17
TOPBP1Q92547 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOPBP1Q92547 AL360270.2-201ENST00000562952 5985 ntBASIC7.74□□□□□ -1.17
TOPBP1Q92547 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOPBP1Q92547 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
TOPBP1Q92547 MIR554-201ENST00000384874 96 ntBASIC7.74□□□□□ -1.17
TOPBP1Q92547 AC092162.1-201ENST00000432828 434 ntBASIC7.74□□□□□ -1.17
TOPBP1Q92547 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC7.74□□□□□ -1.17
TOPBP1Q92547 AL356863.1-201ENST00000623378 1080 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms