Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 IL6STP1-201ENST00000346911 1020 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RNU1-94P-201ENST00000362627 173 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RNA5SP433-201ENST00000364491 114 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RNA5SP90-201ENST00000364801 99 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 SNORD65-201ENST00000391079 73 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RNA5SP105-201ENST00000391123 113 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 BMS1P17-202ENST00000416720 316 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 PTP4A1P1-201ENST00000420539 515 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 FABP7P1-201ENST00000424004 391 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 NDUFA5P10-201ENST00000432147 357 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 TMX2P1-201ENST00000436507 708 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RPS29P10-201ENST00000439197 166 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RHEBP2-201ENST00000450289 600 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 MTND2P6-201ENST00000455337 1030 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RPSAP39-201ENST00000467439 883 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RN7SL51P-201ENST00000468230 285 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RPL23AP37-201ENST00000479658 549 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC138866.2-201ENST00000508650 584 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC021146.7-201ENST00000509604 775 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RNU6-1102P-201ENST00000516149 96 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RN7SKP183-201ENST00000517169 324 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 HIGD1AP18-201ENST00000520730 278 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AP002373.2-201ENST00000541631 1060 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 BLZF2P-201ENST00000553776 1130 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AL049830.4-201ENST00000555149 351 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RBM22P1-201ENST00000578589 1214 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 SNX6P1-201ENST00000601728 1224 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC067773.1-201ENST00000603284 1094 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC005021.1-201ENST00000608730 355 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC000068.2-201ENST00000608816 460 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AL121890.2-201ENST00000617644 465 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AC025262.3-201ENST00000623666 360 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 CU639417.4-201ENST00000623928 207 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 AP000720.1-201ENST00000625091 483 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.32□□□□□ -1.72
BEST4Q8NFU0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BEST4Q8NFU0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 RN7SKP275-201ENST00000364626 301 ntBASIC4.31□□□□□ -1.72
BEST4Q8NFU0 RNA5SP122-201ENST00000384457 108 ntBASIC4.31□□□□□ -1.72
BEST4Q8NFU0 RNU6-244P-201ENST00000391028 104 ntBASIC4.31□□□□□ -1.72
BEST4Q8NFU0 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 AC004690.1-201ENST00000418216 328 ntBASIC4.31□□□□□ -1.72
BEST4Q8NFU0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 CKS1BP6-201ENST00000424932 240 ntBASIC4.31□□□□□ -1.72
BEST4Q8NFU0 DSTNP5-201ENST00000427921 523 ntBASIC4.31□□□□□ -1.72
BEST4Q8NFU0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.31□□□□□ -1.72
BEST4Q8NFU0 PA2G4P6-201ENST00000438325 1197 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms