Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 Z74021.1-201ENST00000423610 407 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC115283.1-201ENST00000427353 400 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 RPS20P1-201ENST00000434853 354 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 EIF4A1P11-201ENST00000451239 222 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AL445665.1-202ENST00000452436 324 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 FGF7P3-201ENST00000454645 303 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 RPSAP39-201ENST00000467439 883 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 RPS26P28-201ENST00000470806 348 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC108022.1-201ENST00000493466 478 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 VTA1P2-201ENST00000520205 911 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC068446.3-201ENST00000555285 382 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC090515.3-201ENST00000560431 315 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 OR1F2P-201ENST00000570470 933 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AL121834.1-201ENST00000572284 509 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC027455.1-201ENST00000574104 594 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC090948.2-201ENST00000607363 564 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 MIR6071-201ENST00000616741 78 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 AC067931.1-201ENST00000624190 671 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 MTND4P26-201ENST00000415971 1359 ntBASIC3.61□□□□□ -1.83
NUP35Q8NFH5 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NUP35Q8NFH5 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 VPS35P1-201ENST00000563400 1518 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 OR56B2P-201ENST00000317102 954 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 MIR448-201ENST00000362131 111 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 RNA5SP46-201ENST00000362370 120 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 RNA5SP319-201ENST00000362768 119 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 MIR600-201ENST00000385007 98 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 HSPD1P16-201ENST00000402302 394 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC099535.1-201ENST00000408928 371 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 TNPO1P1-201ENST00000423641 1138 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 MTCO1P51-201ENST00000427672 1060 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 PRPF38AP2-201ENST00000438179 851 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC069285.2-201ENST00000440210 275 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 MTND6P32-201ENST00000457611 483 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC010469.1-201ENST00000463864 576 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 OR2A1-AS1-202ENST00000467944 422 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC012158.1-204ENST00000483430 465 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 RPS4XP20-201ENST00000505751 772 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC006499.4-201ENST00000510947 694 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 RNU6-709P-201ENST00000517257 104 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 CYCSP22-201ENST00000517555 339 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC100770.1-201ENST00000532310 322 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AL121839.1-201ENST00000556233 1185 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC015720.2-201ENST00000567709 334 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 SNORA74C-1-201ENST00000580726 201 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC209154.1-201ENST00000582156 337 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC108865.2-201ENST00000606881 432 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC015813.4-201ENST00000610469 179 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AL096712.1-201ENST00000614561 159 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AC023509.5-201ENST00000617434 807 ntBASIC3.6□□□□□ -1.83
NUP35Q8NFH5 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.6□□□□□ -1.83
NUP35Q8NFH5 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms