Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC33Q8N5R6 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CCDC33Q8N5R6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC33Q8N5R6 SMG1P7-201ENST00000565246 2704 ntBASIC5.82□□□□□ -1.48
CCDC33Q8N5R6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC33Q8N5R6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCDC33Q8N5R6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 RNA5SP319-201ENST00000362768 119 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 RNU6-249P-201ENST00000363016 102 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 RNA5SP131-201ENST00000365452 119 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 SNORA5.1-201ENST00000384275 131 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 SNORA70-201ENST00000384436 135 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC009804.1-201ENST00000400949 179 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 MIR937-201ENST00000401271 86 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 VN1R21P-201ENST00000426703 765 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 NANOGP4-201ENST00000427230 913 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 NPM1P22-201ENST00000427761 952 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 MED28P3-201ENST00000444288 531 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC093270.2-201ENST00000486157 792 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 RN7SL30P-201ENST00000488416 306 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 OR5AK3P-201ENST00000527486 1297 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC004825.1-201ENST00000555068 586 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 MRPS21P7-201ENST00000566937 238 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 MIR4789-201ENST00000577469 82 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 SUGT1P3-202ENST00000604259 383 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 FRG1HP-204ENST00000617940 757 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC009452.1-201ENST00000640823 606 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 AC007996.1-201ENST00000620414 2821 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 CASC19-284ENST00000642142 1868 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 RBPJP2-201ENST00000618187 1444 ntBASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
CCDC33Q8N5R6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 BCORP1-203ENST00000513194 5093 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 AP000473.2-201ENST00000602659 1537 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 MRRFP1-201ENST00000435941 1675 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 RNU1-136P-201ENST00000384181 164 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 RNU6-932P-201ENST00000391108 106 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 RPL11P3-201ENST00000395256 523 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 RN7SKP279-201ENST00000411383 298 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 AC105402.1-201ENST00000413336 545 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 USP12PY-201ENST00000427677 1064 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 AC022022.1-201ENST00000430304 178 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 GAPDHP58-201ENST00000438477 1006 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 RPS23P9-201ENST00000448848 438 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 RPS3AP15-201ENST00000483874 781 ntBASIC5.8□□□□□ -1.48
CCDC33Q8N5R6 RN7SL570P-201ENST00000484405 292 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms