Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 PRPF38AP2-201ENST00000438179 851 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC020779.1-201ENST00000478757 796 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 METTL15P1-201ENST00000481421 1045 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC093720.1-201ENST00000505681 714 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 GLUD1P3-202ENST00000508551 200 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 MTND4LP31-201ENST00000514859 294 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 RNU6-1102P-201ENST00000516149 96 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 RNU6-943P-201ENST00000516960 98 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 VTA1P2-201ENST00000520205 911 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 C1GALT1P3-201ENST00000522049 819 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 MTCO1P47-201ENST00000523889 1271 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 SOX5P1-201ENST00000524155 1127 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 ATP5J2P6-201ENST00000565203 266 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 AC135178.6-201ENST00000605314 398 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 AL450270.1-201ENST00000606160 391 ntBASIC6.44□□□□□ -1.38
SYNE4Q8N205 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE4Q8N205 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE4Q8N205 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE4Q8N205 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SYNE4Q8N205 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SYNE4Q8N205 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 RN7SKP185-201ENST00000362813 326 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 RNY3P9-201ENST00000384727 106 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 OR8V1P-201ENST00000395193 873 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 RPS16P5-201ENST00000406501 404 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 RCC2P2-201ENST00000422174 918 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 AC124944.2-201ENST00000429866 1242 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 VN1R108P-201ENST00000431580 830 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 MRPS33P4-201ENST00000434892 317 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 AC006427.1-201ENST00000514359 712 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 RN7SKP67-201ENST00000515905 235 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 RNA5SP43-201ENST00000516559 110 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 AC104115.2-201ENST00000523026 687 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 PRELID3BP3-201ENST00000584963 545 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 MTATP6P2-201ENST00000603319 678 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 DUXAP3-201ENST00000603616 594 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 AC104687.2-201ENST00000604442 342 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 AL590410.1-201ENST00000617925 333 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 AP002791.1-201ENST00000623291 381 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 AC016717.3-201ENST00000624730 554 ntBASIC6.43□□□□□ -1.38
SYNE4Q8N205 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SYNE4Q8N205 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.43□□□□□ -1.38
SYNE4Q8N205 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE4Q8N205 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC079741.1-201ENST00000321498 212 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SYNE4Q8N205 RPL32P3-201ENST00000359025 275 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 RNA5SP191-201ENST00000362585 102 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 RNU6-650P-201ENST00000365658 111 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 MIR589-201ENST00000385238 99 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 P2RY10P2-201ENST00000416730 913 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.42□□□□□ -1.38
SYNE4Q8N205 DNAJC19P7-201ENST00000428811 344 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 RPL36AP15-201ENST00000444514 266 ntBASIC6.42□□□□□ -1.38
SYNE4Q8N205 AC012512.1-201ENST00000446594 718 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms