Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AP005435.3-201ENST00000531260 3198 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 VPS35P1-201ENST00000563400 1518 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 RNU1-136P-201ENST00000384181 164 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AL034374.1-201ENST00000406329 351 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 GJA6P-201ENST00000415117 1042 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AC008072.1-201ENST00000434254 824 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AL138878.2-201ENST00000440581 1241 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AC011753.3-201ENST00000443436 406 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AC090602.1-201ENST00000469695 252 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 RN7SL459P-201ENST00000481078 302 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 ATP5LP5-201ENST00000483050 299 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 YWHABP2-201ENST00000540201 713 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AC104072.1-201ENST00000568817 668 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AC008745.1-201ENST00000604064 271 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 BNIP3P31-201ENST00000604515 566 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AP000346.3-201ENST00000622821 210 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AC112694.2-201ENST00000623697 768 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AL121839.2-201ENST00000565058 6943 ntBASIC5.79□□□□□ -1.48
HERC6Q8IVU3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
HERC6Q8IVU3 AP001284.1-201ENST00000528393 2118 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AL360270.2-201ENST00000562952 5985 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 RN7SKP149-201ENST00000363008 344 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 RNA5SP326-201ENST00000363209 110 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 MIR105-1-201ENST00000385222 81 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AL356967.1-201ENST00000406305 431 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 RPSAP35-201ENST00000413753 818 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AL606495.1-201ENST00000422100 813 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AL354766.1-201ENST00000423396 542 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 BX276092.6-201ENST00000430476 250 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 BX119904.1-201ENST00000432026 348 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 BX276092.8-201ENST00000455722 250 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC097484.1-201ENST00000471148 389 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 RPL7P40-201ENST00000481703 745 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 GTF2F2P1-201ENST00000511083 675 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC008033.2-201ENST00000542626 177 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AL358913.1-201ENST00000554342 121 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC060780.2-201ENST00000589047 198 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 ABI1P1-201ENST00000603375 1120 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AL078621.3-201ENST00000623707 2042 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC073869.10-201ENST00000642016 354 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms