Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC28Q86X40 AC004453.1-201ENST00000487895 408 ntBASIC4.36□□□□□ -1.71
LRRC28Q86X40 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC28Q86X40 AC134698.5-201ENST00000519444 336 ntBASIC4.36□□□□□ -1.71
LRRC28Q86X40 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.36□□□□□ -1.71
LRRC28Q86X40 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC28Q86X40 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC28Q86X40 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.36□□□□□ -1.71
LRRC28Q86X40 BX323046.1-201ENST00000610145 535 ntBASIC4.36□□□□□ -1.71
LRRC28Q86X40 AP002799.1-201ENST00000623552 423 ntBASIC4.36□□□□□ -1.71
LRRC28Q86X40 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC28Q86X40 MIPEPP2-201ENST00000422560 1819 ntBASIC4.36□□□□□ -1.71
LRRC28Q86X40 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC28Q86X40 MTCO1P22-201ENST00000604619 1360 ntBASIC4.36□□□□□ -1.71
LRRC28Q86X40 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LRRC28Q86X40 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
LRRC28Q86X40 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LRRC28Q86X40 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.36□□□□□ -1.71
LRRC28Q86X40 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC28Q86X40 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC28Q86X40 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 RN7SKP104-201ENST00000362605 328 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 SNORA66-201ENST00000384792 133 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 SNORD96B-201ENST00000386148 79 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 RNA5SP372-201ENST00000390836 115 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 SEPT7P8-201ENST00000413308 775 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 EI24P4-201ENST00000423683 1078 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC092162.1-201ENST00000432828 434 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC073850.1-201ENST00000449243 255 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AL691482.1-201ENST00000453255 87 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 RN7SL517P-201ENST00000462240 305 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 RN7SL329P-201ENST00000467740 299 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC097484.1-201ENST00000471148 389 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 RPL7AP6-201ENST00000477943 801 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC113430.1-201ENST00000506872 718 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 STMN1P2-201ENST00000508435 439 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC092490.3-201ENST00000545370 572 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC011270.1-201ENST00000558606 583 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC079075.1-201ENST00000559543 878 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 RN7SL176P-201ENST00000580352 264 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC087763.1-201ENST00000603391 286 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AL021707.7-201ENST00000607991 416 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AC068870.2-201ENST00000620635 389 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 OR14L1P-202ENST00000641545 3009 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 MTND5P12-201ENST00000502851 1449 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC28Q86X40 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC28Q86X40 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 MAPK10-303ENST00000641324 3959 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRRC28Q86X40 LINC01109-201ENST00000603837 3081 ntBASIC4.35□□□□□ -1.71
LRRC28Q86X40 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LRRC28Q86X40 THAP12P4-201ENST00000528321 2266 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 RN7SKP224-201ENST00000364140 325 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 RNU1-106P-201ENST00000384382 164 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 RPS24P12-201ENST00000402084 394 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 U3.35-201ENST00000408405 208 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC093162.1-201ENST00000419682 124 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC004448.2-201ENST00000422360 586 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AL450023.3-201ENST00000440592 271 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 HMGB3P9-201ENST00000441799 583 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC092647.2-201ENST00000452998 253 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 RPS17P2-201ENST00000461663 408 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 BX284632.1-201ENST00000478218 541 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 RN7SL817P-201ENST00000480777 288 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC28Q86X40 RPL32P9-201ENST00000487963 407 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 RN7SL558P-201ENST00000497468 299 ntBASIC4.34□□□□□ -1.71
LRRC28Q86X40 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.34□□□□□ -1.71
LRRC28Q86X40 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms