Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS13CQ709C8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS13CQ709C8 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS13CQ709C8 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
VPS13CQ709C8 RNA5SP360-201ENST00000516555 118 ntBASIC3.73□□□□□ -1.81
VPS13CQ709C8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS13CQ709C8 AC053481.4-201ENST00000583164 216 ntBASIC3.73□□□□□ -1.81
VPS13CQ709C8 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS13CQ709C8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS13CQ709C8 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS13CQ709C8 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS13CQ709C8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 MAPK10-328ENST00000641553 4009 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 Z98745.1-201ENST00000402553 494 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 U3.35-201ENST00000408405 208 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 AC099670.2-201ENST00000435130 321 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 RPL21P89-201ENST00000444021 467 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 snoU13.29-201ENST00000459370 104 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 AC091564.1-201ENST00000464563 479 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 AC104763.1-201ENST00000475274 360 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 AK4P6-201ENST00000505168 528 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 AC107016.1-201ENST00000550463 337 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 RN7SL435P-201ENST00000584418 282 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 AL031595.3-201ENST00000624919 14262 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 SNORA62.3-201ENST00000365110 153 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 AC009120.7-201ENST00000623452 780 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 CPHL1P-201ENST00000461341 3407 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS13CQ709C8 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 CDY14P-201ENST00000431260 1014 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 ARAFP2-201ENST00000440565 559 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 CDY12P-201ENST00000440679 1015 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 CDY13P-201ENST00000445813 1015 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 CDY23P-201ENST00000451661 1014 ntBASIC3.72□□□□□ -1.81
VPS13CQ709C8 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS13CQ709C8 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC3.71□□□□□ -1.81
VPS13CQ709C8 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
VPS13CQ709C8 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 RNA5SP241-201ENST00000391326 114 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 AC018695.5-201ENST00000605872 315 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 AL356863.1-201ENST00000623378 1080 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 AC007382.1-201ENST00000624376 2618 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 AC015813.6-201ENST00000624409 5808 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 DMD-222ENST00000474231 5209 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 Y_RNA.111-201ENST00000363248 100 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 AC005618.4-201ENST00000625053 554 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 DOCK11P1-201ENST00000553480 5932 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VPS13CQ709C8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS13CQ709C8 MT-RNR1-201ENST00000389680 954 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 H2AFZP5-201ENST00000446960 382 ntBASIC3.71□□□□□ -1.82
VPS13CQ709C8 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms