Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.19□□□□□ -1.1
VARS2Q5ST30 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
VARS2Q5ST30 AL035555.1-201ENST00000404462 1790 ntBASIC8.19□□□□□ -1.1
VARS2Q5ST30 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARS2Q5ST30 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARS2Q5ST30 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
VARS2Q5ST30 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC8.19□□□□□ -1.1
VARS2Q5ST30 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
VARS2Q5ST30 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.19□□□□□ -1.1
VARS2Q5ST30 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
VARS2Q5ST30 AC091812.1-201ENST00000432235 1948 ntBASIC8.19□□□□□ -1.1
VARS2Q5ST30 AC027287.1-201ENST00000553115 1453 ntBASIC8.19□□□□□ -1.1
VARS2Q5ST30 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.19□□□□□ -1.1
VARS2Q5ST30 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 CDY19P-201ENST00000411668 1613 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 CDY18P-201ENST00000438294 1609 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 Y_RNA.222-201ENST00000364264 102 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 Y_RNA.274-201ENST00000364714 101 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 Y_RNA.376-201ENST00000365638 108 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 SUGT1P1-201ENST00000379514 476 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AL139327.1-201ENST00000382988 348 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 Y_RNA.518-201ENST00000384552 113 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 BTBD10P2-201ENST00000404779 676 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 RN7SKP261-201ENST00000410948 278 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AL161742.1-201ENST00000418154 584 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 SNX18P14-201ENST00000429308 574 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 GPR143P-201ENST00000434155 205 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 PRPS1P1-201ENST00000445305 876 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC013399.1-201ENST00000450311 418 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC073476.1-201ENST00000452854 407 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 GMFBP1-201ENST00000467831 427 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC126389.1-201ENST00000477436 290 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 MRPL49P1-201ENST00000505951 535 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 LINC01085-203ENST00000511195 326 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 RNU6-475P-201ENST00000516073 104 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 RNU4ATAC8P-201ENST00000516196 109 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 RNU6-1261P-201ENST00000517194 104 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 RNA5SP454-201ENST00000517231 127 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 SUMO2P20-201ENST00000520803 283 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 OR7E87P-201ENST00000532397 929 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AL049870.4-201ENST00000555741 486 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC025884.1-201ENST00000556034 378 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC245052.7-201ENST00000601161 359 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AL513327.3-201ENST00000602618 469 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC007255.2-201ENST00000604053 631 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 DUSP12P1-201ENST00000612874 516 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 AC022467.1-201ENST00000614738 749 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 SLC20A1P2-201ENST00000618036 966 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 FOLH1B-202ENST00000529567 2145 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.18□□□□□ -1.1
VARS2Q5ST30 VEZF1P1-201ENST00000423931 1541 ntBASIC8.18□□□□□ -1.1
VARS2Q5ST30 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
VARS2Q5ST30 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VARS2Q5ST30 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARS2Q5ST30 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARS2Q5ST30 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC8.17□□□□□ -1.1
VARS2Q5ST30 AC008498.2-201ENST00000624033 2322 ntBASIC8.17□□□□□ -1.1
VARS2Q5ST30 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARS2Q5ST30 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VARS2Q5ST30 Y_RNA.20-201ENST00000362479 113 ntBASIC8.17□□□□□ -1.1
VARS2Q5ST30 RNA5SP218-201ENST00000363188 109 ntBASIC8.17□□□□□ -1.1
VARS2Q5ST30 Y_RNA.297-201ENST00000364950 91 ntBASIC8.17□□□□□ -1.1
VARS2Q5ST30 RNU6-48P-201ENST00000384161 107 ntBASIC8.17□□□□□ -1.1
VARS2Q5ST30 SNORD15A-201ENST00000384214 148 ntBASIC8.17□□□□□ -1.1
VARS2Q5ST30 MIR1-2-201ENST00000384961 85 ntBASIC8.17□□□□□ -1.1
VARS2Q5ST30 SRI-202ENST00000394641 653 ntTSL 2 BASIC8.17□□□□□ -1.1
VARS2Q5ST30 NDUFS5P1-201ENST00000405668 289 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms