Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.65□□□□□ -1.51
GABPAQ06546 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
GABPAQ06546 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
GABPAQ06546 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.65□□□□□ -1.51
GABPAQ06546 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
GABPAQ06546 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
GABPAQ06546 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
GABPAQ06546 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 AC010132.2-201ENST00000295493 1043 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 ATG4AP1-201ENST00000416893 538 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 RPS27AP7-201ENST00000422792 455 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 TRGV7-201ENST00000427089 353 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 AC097523.2-201ENST00000435551 652 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.64□□□□□ -1.51
GABPAQ06546 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.64□□□□□ -1.51
GABPAQ06546 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.64□□□□□ -1.51
GABPAQ06546 AC091917.2-201ENST00000505002 744 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 AC093720.1-201ENST00000505681 714 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 AC111000.3-201ENST00000508057 576 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 RNU1-6P-201ENST00000516290 144 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 C1GALT1P3-201ENST00000522049 819 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 AC006349.1-201ENST00000555526 235 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.64□□□□□ -1.51
GABPAQ06546 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 AF230666.2-201ENST00000602328 725 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 MIR378J-201ENST00000611988 109 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 NF1P10-201ENST00000613227 742 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 AC241377.1-201ENST00000619797 406 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.64□□□□□ -1.51
GABPAQ06546 AC006453.5-201ENST00000636451 619 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GABPAQ06546 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.64□□□□□ -1.51
GABPAQ06546 AC092376.2-201ENST00000622621 4116 ntBASIC5.64□□□□□ -1.51
GABPAQ06546 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
GABPAQ06546 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
GABPAQ06546 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
GABPAQ06546 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
GABPAQ06546 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
GABPAQ06546 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
GABPAQ06546 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
GABPAQ06546 SNORD113.2-201ENST00000364166 89 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 RN7SKP186-201ENST00000365371 303 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.63□□□□□ -1.51
GABPAQ06546 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.63□□□□□ -1.51
GABPAQ06546 AC092162.1-201ENST00000432828 434 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 RPL35AP21-201ENST00000437667 333 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 AC108463.1-201ENST00000450258 347 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 CYCSP42-201ENST00000450823 238 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 OR52A4P-201ENST00000472867 958 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 AP000926.3-201ENST00000497201 299 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 AC105031.1-201ENST00000518550 476 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 AC005868.1-201ENST00000536421 331 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.63□□□□□ -1.51
GABPAQ06546 AC084033.1-201ENST00000550830 633 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.63□□□□□ -1.51
GABPAQ06546 AC027216.1-201ENST00000577726 685 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 AC010615.3-201ENST00000597319 394 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.63□□□□□ -1.51
GABPAQ06546 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.63□□□□□ -1.51
GABPAQ06546 ADAM5-202ENST00000399789 1942 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
GABPAQ06546 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.63□□□□□ -1.51
GABPAQ06546 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
GABPAQ06546 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 SOCS5P3-201ENST00000425115 1576 ntBASIC5.63□□□□□ -1.51
GABPAQ06546 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
GABPAQ06546 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GABPAQ06546 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.62□□□□□ -1.51
GABPAQ06546 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.62□□□□□ -1.51
GABPAQ06546 ZFRP1-201ENST00000457579 2970 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
GABPAQ06546 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms