Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RN7SL558P-201ENST00000497468 299 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC010424.2-201ENST00000607594 443 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 MIR7155-201ENST00000615925 56 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 AC022106.2-201ENST00000620114 757 ntBASIC4.65□□□□□ -1.67
HMGCS1Q01581 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
HMGCS1Q01581 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS1Q01581 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS1Q01581 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HMGCS1Q01581 AP001642.1-201ENST00000624727 2117 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS1Q01581 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC099654.2-201ENST00000433031 1980 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS1Q01581 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 RNU6-167P-201ENST00000384292 106 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 MIR137-201ENST00000385223 102 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 EIF4A1P1-201ENST00000420241 934 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 PTP4A1P1-201ENST00000420539 515 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 NMNAT1P2-201ENST00000435192 860 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 PTMAP6-201ENST00000439110 327 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 SNRPFP2-201ENST00000440710 251 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC239798.3-201ENST00000454459 408 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 RPL23AP56-201ENST00000460778 453 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC112206.1-201ENST00000468416 477 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC004453.1-201ENST00000487895 408 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 RN7SKP147-201ENST00000517154 244 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC093249.4-201ENST00000564755 259 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 AP000919.1-201ENST00000582850 985 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 AL353662.3-201ENST00000625131 237 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.64□□□□□ -1.67
HMGCS1Q01581 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCS1Q01581 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCS1Q01581 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 RNU4-4P-201ENST00000364588 130 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AL645927.1-201ENST00000396783 406 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 CHMP1B2P-201ENST00000399581 597 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AP000580.1-201ENST00000404439 358 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 GTF2IP5-201ENST00000414608 731 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AC093414.1-201ENST00000434712 514 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 RPL7P11-201ENST00000437586 658 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 VN1R96P-201ENST00000446052 858 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 RPL37AP8-201ENST00000494116 276 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AC140172.1-201ENST00000502928 141 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AC073358.1-201ENST00000505671 684 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AL671862.1-201ENST00000515851 349 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 RNU6-513P-201ENST00000516104 104 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AL358913.1-201ENST00000554342 121 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AC068870.2-201ENST00000620635 389 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AC006453.5-201ENST00000636451 619 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 AC138627.1-204ENST00000641894 765 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 AL359922.3-201ENST00000624779 1670 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HMGCS1Q01581 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms