Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 JPX-212ENST00000639185 9658 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HSPG2P98160 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 HMGN2P31-201ENST00000432430 273 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AC046176.1-201ENST00000435260 1170 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 AC005000.2-201ENST00000605468 310 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 SDHCP2-201ENST00000398565 501 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC2.82□□□□□ -1.96
HSPG2P98160 NFYAP1-201ENST00000431953 972 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 IGBP1P4-201ENST00000503202 879 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.82□□□□□ -1.96
HSPG2P98160 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 MIMT1-201ENST00000597105 1050 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 AL391261.4-201ENST00000616012 481 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 U3.53-201ENST00000628922 216 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 MAPK6PS2-201ENST00000379571 2060 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 EIF2AP4-201ENST00000424793 1781 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 RPL23AP38-201ENST00000423801 469 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AL050321.1-201ENST00000432363 400 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC2.82□□□□□ -1.96
HSPG2P98160 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.82□□□□□ -1.96
HSPG2P98160 OR5BC1P-201ENST00000529327 739 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 RPL21P12-201ENST00000559810 515 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC2.82□□□□□ -1.96
HSPG2P98160 IPO5P1-202ENST00000600039 287 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AL451086.1-201ENST00000605596 223 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AL139124.1-201ENST00000609123 421 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 AC011447.7-201ENST00000624228 1590 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC2.82□□□□□ -1.96
HSPG2P98160 AC068533.1-201ENST00000418542 415 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC2.82□□□□□ -1.96
HSPG2P98160 H2AFZP5-201ENST00000446960 382 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.82□□□□□ -1.96
HSPG2P98160 TAAR4P-201ENST00000454843 1039 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.82□□□□□ -1.96
HSPG2P98160 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 MTCYBP13-201ENST00000578634 1093 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 SNORA74C-1-201ENST00000580726 201 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.82□□□□□ -1.96
HSPG2P98160 AC091979.2-201ENST00000607514 214 ntBASIC2.82□□□□□ -1.96
HSPG2P98160 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HSPG2P98160 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 AC073346.2-201ENST00000624724 2058 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
HSPG2P98160 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC2.81□□□□□ -1.96
HSPG2P98160 AC120036.2-201ENST00000509729 1474 ntBASIC2.81□□□□□ -1.96
HSPG2P98160 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HSPG2P98160 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HSPG2P98160 LINC00993-201ENST00000420453 540 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms