Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNA1P78396 P2RY10P2-201ENST00000416730 913 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 HYALP1-201ENST00000417674 1279 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNA1P78396 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.65□□□□□ -1.5
CCNA1P78396 RPL12P18-201ENST00000437175 325 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 AC016831.4-201ENST00000438302 307 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNA1P78396 VN1R96P-201ENST00000446052 858 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.65□□□□□ -1.5
CCNA1P78396 AC010733.1-201ENST00000451515 401 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNA1P78396 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CCNA1P78396 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNA1P78396 RN7SKP34-201ENST00000516142 244 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNA1P78396 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.65□□□□□ -1.5
CCNA1P78396 PARP1P2-201ENST00000556806 195 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNA1P78396 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.65□□□□□ -1.5
CCNA1P78396 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.65□□□□□ -1.5
CCNA1P78396 AC020915.5-201ENST00000596836 964 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.65□□□□□ -1.5
CCNA1P78396 AC016717.3-201ENST00000624730 554 ntBASIC5.65□□□□□ -1.5
CCNA1P78396 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNA1P78396 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCNA1P78396 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCNA1P78396 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCNA1P78396 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCNA1P78396 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCNA1P78396 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCNA1P78396 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CCNA1P78396 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNA1P78396 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNA1P78396 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNA1P78396 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNA1P78396 KARSP3-201ENST00000571212 1504 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNA1P78396 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNA1P78396 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNA1P78396 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNA1P78396 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNA1P78396 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNA1P78396 AL022311.1-201ENST00000623726 19416 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNA1P78396 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNA1P78396 RNA5SP453-201ENST00000362503 119 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCNA1P78396 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNA1P78396 GNG5P5-201ENST00000420444 220 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 CENPIP1-201ENST00000425713 902 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 TXNP5-201ENST00000441043 315 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNA1P78396 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNA1P78396 TRBV8-1-201ENST00000481590 279 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 OR9N1P-201ENST00000491296 333 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.64□□□□□ -1.51
CCNA1P78396 SNORA70.11-201ENST00000515987 138 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 SNORA70.13-201ENST00000516116 138 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNA1P78396 AC136624.4-201ENST00000573044 370 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNA1P78396 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.64□□□□□ -1.51
CCNA1P78396 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNA1P78396 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNA1P78396 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNA1P78396 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNA1P78396 AC093765.1-201ENST00000603758 881 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNA1P78396 AC007497.1-201ENST00000610421 561 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 AL049794.2-201ENST00000616301 365 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 AC006338.2-201ENST00000616864 791 ntBASIC5.64□□□□□ -1.51
CCNA1P78396 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCNA1P78396 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
CCNA1P78396 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNA1P78396 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNA1P78396 AC010300.1-201ENST00000600671 5134 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNA1P78396 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
CCNA1P78396 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNA1P78396 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CCNA1P78396 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNA1P78396 RNU6-1320P-201ENST00000390838 107 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 RNU6-1269P-201ENST00000391139 107 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 EI24P3-201ENST00000399046 1062 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 AL035079.1-201ENST00000405210 287 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNA1P78396 RN7SKP106-201ENST00000410832 272 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 RPS27AP7-201ENST00000422792 455 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNA1P78396 BX276092.6-201ENST00000430476 250 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNA1P78396 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCNA1P78396 GAPDHP14-201ENST00000450472 937 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms