Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.54□□□□□ -1.84
CKS1BP61024 AC130364.2-201ENST00000528639 604 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AL049872.1-201ENST00000556323 322 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.54□□□□□ -1.84
CKS1BP61024 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC3.54□□□□□ -1.84
CKS1BP61024 AC004241.3-201ENST00000611728 517 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.54□□□□□ -1.84
CKS1BP61024 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CKS1BP61024 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
CKS1BP61024 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 HCFC2P1-201ENST00000392864 1592 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 MTCO1P14-201ENST00000441695 1559 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.54□□□□□ -1.84
CKS1BP61024 AC090181.3-201ENST00000624777 1514 ntBASIC3.54□□□□□ -1.84
CKS1BP61024 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CKS1BP61024 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CKS1BP61024 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 AC106872.5-201ENST00000508856 1416 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC3.53□□□□□ -1.84
CKS1BP61024 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC3.53□□□□□ -1.84
CKS1BP61024 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 YES1P1-201ENST00000418510 1628 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AC009313.2-201ENST00000417893 1941 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.53□□□□□ -1.84
CKS1BP61024 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.53□□□□□ -1.84
CKS1BP61024 MIR93-201ENST00000385024 80 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 MIR105-1-201ENST00000385222 81 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CKS1BP61024 OR8V1P-201ENST00000395193 873 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CKS1BP61024 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.53□□□□□ -1.84
CKS1BP61024 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC3.53□□□□□ -1.84
CKS1BP61024 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.53□□□□□ -1.84
CKS1BP61024 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.53□□□□□ -1.84
CKS1BP61024 AC127526.2-201ENST00000426436 775 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC3.53□□□□□ -1.84
CKS1BP61024 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 RPS29P14-201ENST00000431518 171 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.53□□□□□ -1.84
CKS1BP61024 AC046176.1-201ENST00000435260 1170 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 CLNS1AP1-201ENST00000435954 682 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 BX842559.2-201ENST00000451418 605 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AC093166.2-201ENST00000455969 1017 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 MTND6P32-201ENST00000457611 483 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 PPIAP21-201ENST00000464473 501 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 RPS23P6-201ENST00000466136 431 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 CBX1P5-201ENST00000475330 559 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 RN7SL817P-201ENST00000480777 288 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 METTL15P1-201ENST00000481421 1045 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CKS1BP61024 RN7SL423P-201ENST00000486202 304 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC3.53□□□□□ -1.84
CKS1BP61024 SNORA43.3-201ENST00000517240 103 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AC011853.1-201ENST00000518911 454 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.53□□□□□ -1.84
CKS1BP61024 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC3.53□□□□□ -1.84
CKS1BP61024 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC3.53□□□□□ -1.84
CKS1BP61024 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC3.53□□□□□ -1.84
CKS1BP61024 AC006512.2-201ENST00000543250 486 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.53□□□□□ -1.84
CKS1BP61024 AC138207.8-204ENST00000579588 527 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 RN7SL708P-201ENST00000580952 299 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.53□□□□□ -1.84
CKS1BP61024 IGLCOR22-2-201ENST00000605398 313 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AC008115.3-201ENST00000614874 549 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 HTR1DP1-201ENST00000616500 888 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC3.53□□□□□ -1.84
CKS1BP61024 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC3.53□□□□□ -1.84
CKS1BP61024 AL683826.1-201ENST00000624104 627 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CKS1BP61024 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CKS1BP61024 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CKS1BP61024 AC074101.1-201ENST00000637861 241 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 5S_rRNA.28-201ENST00000638107 119 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 AC009452.1-201ENST00000640823 606 ntBASIC3.53□□□□□ -1.84
CKS1BP61024 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CKS1BP61024 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.53□□□□□ -1.84
CKS1BP61024 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CKS1BP61024 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CKS1BP61024 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CKS1BP61024 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CKS1BP61024 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.52□□□□□ -1.85
CKS1BP61024 AC005294.1-201ENST00000355509 281 ntBASIC3.52□□□□□ -1.85
CKS1BP61024 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms