Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 TRIM51GP-201ENST00000534741 1350 ntBASIC5.01□□□□□ -1.61
CDH12P55289 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CDH12P55289 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH12P55289 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CDH12P55289 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CDH12P55289 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CDH12P55289 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5□□□□□ -1.61
CDH12P55289 SPATA2P1-201ENST00000431223 2055 ntBASIC5□□□□□ -1.61
CDH12P55289 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CDH12P55289 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 RN7SKP6-201ENST00000364795 319 ntBASIC5□□□□□ -1.61
CDH12P55289 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDH12P55289 AC099535.1-201ENST00000408928 371 ntBASIC5□□□□□ -1.61
CDH12P55289 MTATP6P20-201ENST00000414147 562 ntBASIC5□□□□□ -1.61
CDH12P55289 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5□□□□□ -1.61
CDH12P55289 AC023128.2-201ENST00000420880 1223 ntBASIC5□□□□□ -1.61
CDH12P55289 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5□□□□□ -1.61
CDH12P55289 OR6D1P-201ENST00000436165 939 ntBASIC5□□□□□ -1.61
CDH12P55289 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5□□□□□ -1.61
CDH12P55289 AL450996.1-201ENST00000445574 1202 ntBASIC5□□□□□ -1.61
CDH12P55289 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CDH12P55289 MTND1P31-201ENST00000449206 961 ntBASIC5□□□□□ -1.61
CDH12P55289 AL096803.2-201ENST00000450032 677 ntBASIC5□□□□□ -1.61
CDH12P55289 AL450023.1-201ENST00000450868 751 ntBASIC5□□□□□ -1.61
CDH12P55289 CALM1P2-201ENST00000452941 448 ntBASIC5□□□□□ -1.61
CDH12P55289 RPS20P4-201ENST00000461659 355 ntBASIC5□□□□□ -1.61
CDH12P55289 RN7SL741P-201ENST00000482473 289 ntBASIC5□□□□□ -1.61
CDH12P55289 COX6B1P2-201ENST00000489624 230 ntBASIC5□□□□□ -1.61
CDH12P55289 RPS27AP16-201ENST00000492222 470 ntBASIC5□□□□□ -1.61
CDH12P55289 EIF3LP3-201ENST00000495197 822 ntBASIC5□□□□□ -1.61
CDH12P55289 CDH12P2-201ENST00000504393 298 ntBASIC5□□□□□ -1.61
CDH12P55289 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5□□□□□ -1.61
CDH12P55289 ENPP7P11-201ENST00000505915 627 ntBASIC5□□□□□ -1.61
CDH12P55289 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5□□□□□ -1.61
CDH12P55289 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 RN7SKP141-201ENST00000516167 338 ntBASIC5□□□□□ -1.61
CDH12P55289 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5□□□□□ -1.61
CDH12P55289 AC005363.1-201ENST00000530779 351 ntBASIC5□□□□□ -1.61
CDH12P55289 AC027369.5-201ENST00000533838 755 ntBASIC5□□□□□ -1.61
CDH12P55289 AC087888.1-201ENST00000550884 1254 ntBASIC5□□□□□ -1.61
CDH12P55289 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5□□□□□ -1.61
CDH12P55289 MTND3P12-201ENST00000559068 328 ntBASIC5□□□□□ -1.61
CDH12P55289 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5□□□□□ -1.61
CDH12P55289 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5□□□□□ -1.61
CDH12P55289 CDC42EP3P1-201ENST00000601004 764 ntBASIC5□□□□□ -1.61
CDH12P55289 AC079315.1-201ENST00000602952 623 ntBASIC5□□□□□ -1.61
CDH12P55289 AC106052.1-201ENST00000608029 497 ntBASIC5□□□□□ -1.61
CDH12P55289 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5□□□□□ -1.61
CDH12P55289 AL096712.1-201ENST00000614561 159 ntBASIC5□□□□□ -1.61
CDH12P55289 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5□□□□□ -1.61
CDH12P55289 AC022079.2-201ENST00000619739 566 ntBASIC5□□□□□ -1.61
CDH12P55289 AC008115.4-201ENST00000619780 775 ntBASIC5□□□□□ -1.61
CDH12P55289 PCF11-AS1-201ENST00000602322 1516 ntBASIC5□□□□□ -1.61
CDH12P55289 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 AC011755.1-201ENST00000623763 2049 ntBASIC5□□□□□ -1.61
CDH12P55289 YES1P1-201ENST00000418510 1628 ntBASIC5□□□□□ -1.61
CDH12P55289 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5□□□□□ -1.61
CDH12P55289 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5□□□□□ -1.61
CDH12P55289 TCP11X1-202ENST00000622971 1372 ntBASIC5□□□□□ -1.61
CDH12P55289 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 AL353796.1-201ENST00000561542 3241 ntBASIC5□□□□□ -1.61
CDH12P55289 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH12P55289 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH12P55289 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH12P55289 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 OR9K1P-202ENST00000641111 3217 ntBASIC4.99□□□□□ -1.61
CDH12P55289 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH12P55289 AC006484.1-201ENST00000435086 1884 ntBASIC4.99□□□□□ -1.61
CDH12P55289 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.99□□□□□ -1.61
CDH12P55289 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH12P55289 RN7SKP74-201ENST00000362849 309 ntBASIC4.99□□□□□ -1.61
CDH12P55289 RNU5B-1-201ENST00000363286 116 ntBASIC4.99□□□□□ -1.61
CDH12P55289 RNU1-19P-201ENST00000363306 165 ntBASIC4.99□□□□□ -1.61
CDH12P55289 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH12P55289 GAPDHP42-201ENST00000406848 981 ntBASIC4.99□□□□□ -1.61
CDH12P55289 HMGN1P20-201ENST00000411849 300 ntBASIC4.99□□□□□ -1.61
CDH12P55289 SLC20A1P1-201ENST00000413906 956 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AL133173.1-201ENST00000423458 397 ntBASIC4.99□□□□□ -1.61
CDH12P55289 AL035246.1-201ENST00000433554 1255 ntBASIC4.99□□□□□ -1.61
CDH12P55289 MTCYBP12-201ENST00000440559 1134 ntBASIC4.99□□□□□ -1.61
CDH12P55289 OR10R1P-201ENST00000441524 1141 ntBASIC4.99□□□□□ -1.61
CDH12P55289 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH12P55289 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH12P55289 AL358794.1-201ENST00000445689 381 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms