Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNU6-709P-201ENST00000517257 104 ntBASIC5.05□□□□□ -1.6
CDH6P55285 AP002981.1-201ENST00000517692 975 ntBASIC5.05□□□□□ -1.6
CDH6P55285 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH6P55285 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.05□□□□□ -1.6
CDH6P55285 MIR4472-2-201ENST00000582069 67 ntBASIC5.05□□□□□ -1.6
CDH6P55285 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.05□□□□□ -1.6
CDH6P55285 AC010424.2-201ENST00000607594 443 ntBASIC5.05□□□□□ -1.6
CDH6P55285 AL589935.2-201ENST00000616471 1231 ntBASIC5.05□□□□□ -1.6
CDH6P55285 AC068870.2-201ENST00000620635 389 ntBASIC5.05□□□□□ -1.6
CDH6P55285 AC091905.4-201ENST00000623432 202 ntBASIC5.05□□□□□ -1.6
CDH6P55285 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.05□□□□□ -1.6
CDH6P55285 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDH6P55285 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH6P55285 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH6P55285 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH6P55285 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CDH6P55285 CASC19-206ENST00000641028 1430 ntBASIC5.05□□□□□ -1.6
CDH6P55285 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
CDH6P55285 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH6P55285 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH6P55285 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CDH6P55285 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH6P55285 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH6P55285 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH6P55285 AL034370.1-201ENST00000397254 1590 ntBASIC5.04□□□□□ -1.6
CDH6P55285 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH6P55285 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CDH6P55285 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH6P55285 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH6P55285 AC008549.2-201ENST00000333482 706 ntBASIC5.04□□□□□ -1.6
CDH6P55285 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 RN7SKP95-201ENST00000362860 303 ntBASIC5.04□□□□□ -1.6
CDH6P55285 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH6P55285 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH6P55285 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH6P55285 AC093414.1-201ENST00000434712 514 ntBASIC5.04□□□□□ -1.6
CDH6P55285 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH6P55285 snoU13.20-201ENST00000459180 104 ntBASIC5.04□□□□□ -1.6
CDH6P55285 RPL23AP56-201ENST00000460778 453 ntBASIC5.04□□□□□ -1.6
CDH6P55285 AGGF1P3-201ENST00000493675 1213 ntBASIC5.04□□□□□ -1.6
CDH6P55285 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.04□□□□□ -1.6
CDH6P55285 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH6P55285 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH6P55285 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CDH6P55285 AC084759.1-201ENST00000561168 290 ntBASIC5.04□□□□□ -1.6
CDH6P55285 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH6P55285 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 AP000919.1-201ENST00000582850 985 ntBASIC5.04□□□□□ -1.6
CDH6P55285 RN7SL435P-201ENST00000584418 282 ntBASIC5.04□□□□□ -1.6
CDH6P55285 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH6P55285 AC112694.2-201ENST00000623697 768 ntBASIC5.04□□□□□ -1.6
CDH6P55285 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH6P55285 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.04□□□□□ -1.6
CDH6P55285 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
CDH6P55285 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH6P55285 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH6P55285 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH6P55285 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH6P55285 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH6P55285 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH6P55285 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH6P55285 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH6P55285 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH6P55285 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CDH6P55285 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH6P55285 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH6P55285 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH6P55285 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CDH6P55285 AL672167.2-201ENST00000377164 879 ntBASIC5.03□□□□□ -1.6
CDH6P55285 VN1R31P-201ENST00000417498 730 ntBASIC5.03□□□□□ -1.6
CDH6P55285 E2F6P2-201ENST00000420708 748 ntBASIC5.03□□□□□ -1.6
CDH6P55285 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH6P55285 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH6P55285 RBMY2QP-201ENST00000429799 1147 ntBASIC5.03□□□□□ -1.6
CDH6P55285 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH6P55285 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH6P55285 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH6P55285 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH6P55285 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH6P55285 OR9N1P-201ENST00000491296 333 ntBASIC5.03□□□□□ -1.6
CDH6P55285 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH6P55285 AC023424.1-201ENST00000496058 459 ntBASIC5.03□□□□□ -1.6
CDH6P55285 RN7SL558P-201ENST00000497468 299 ntBASIC5.03□□□□□ -1.6
CDH6P55285 OR5M14P-201ENST00000506803 618 ntBASIC5.03□□□□□ -1.6
CDH6P55285 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH6P55285 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH6P55285 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH6P55285 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.03□□□□□ -1.6
CDH6P55285 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH6P55285 AC087477.6-201ENST00000559595 843 ntBASIC5.03□□□□□ -1.6
CDH6P55285 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH6P55285 AC124856.1-201ENST00000600819 896 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms