Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-368P-201ENST00000620928 107 ntBASIC5.05□□□□□ -1.6
CDH4P55283 RNU6-538P-201ENST00000622329 107 ntBASIC5.05□□□□□ -1.6
CDH4P55283 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.05□□□□□ -1.6
CDH4P55283 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
CDH4P55283 MAPK10-328ENST00000641553 4009 ntBASIC5.05□□□□□ -1.6
CDH4P55283 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
CDH4P55283 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CDH4P55283 ADAM5-202ENST00000399789 1942 ntBASIC5.05□□□□□ -1.6
CDH4P55283 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDH4P55283 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.05□□□□□ -1.6
CDH4P55283 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.05□□□□□ -1.6
CDH4P55283 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH4P55283 TBCAP2-201ENST00000416175 326 ntBASIC5.04□□□□□ -1.6
CDH4P55283 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 AC106901.1-201ENST00000425086 698 ntBASIC5.04□□□□□ -1.6
CDH4P55283 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH4P55283 AC007559.1-201ENST00000428736 355 ntBASIC5.04□□□□□ -1.6
CDH4P55283 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH4P55283 RPL35AP21-201ENST00000437667 333 ntBASIC5.04□□□□□ -1.6
CDH4P55283 AC073052.1-201ENST00000440417 714 ntBASIC5.04□□□□□ -1.6
CDH4P55283 AC000111.2-201ENST00000448200 210 ntBASIC5.04□□□□□ -1.6
CDH4P55283 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 RPL23AP56-201ENST00000460778 453 ntBASIC5.04□□□□□ -1.6
CDH4P55283 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.04□□□□□ -1.6
CDH4P55283 AC023424.1-201ENST00000496058 459 ntBASIC5.04□□□□□ -1.6
CDH4P55283 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 Y_RNA.719-201ENST00000517156 106 ntBASIC5.04□□□□□ -1.6
CDH4P55283 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 MIR4660-201ENST00000583549 74 ntBASIC5.04□□□□□ -1.6
CDH4P55283 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
CDH4P55283 AC244517.3-201ENST00000616254 1235 ntBASIC5.04□□□□□ -1.6
CDH4P55283 BNIP3P41-202ENST00000616656 861 ntBASIC5.04□□□□□ -1.6
CDH4P55283 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
CDH4P55283 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CDH4P55283 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.04□□□□□ -1.6
CDH4P55283 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 AC004817.4-201ENST00000602396 3625 ntBASIC5.04□□□□□ -1.6
CDH4P55283 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CDH4P55283 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.04□□□□□ -1.6
CDH4P55283 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CDH4P55283 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH4P55283 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CDH4P55283 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH4P55283 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH4P55283 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CDH4P55283 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH4P55283 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH4P55283 AC008758.3-201ENST00000507003 1829 ntBASIC5.03□□□□□ -1.6
CDH4P55283 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH4P55283 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH4P55283 AL357515.1-201ENST00000402967 542 ntBASIC5.03□□□□□ -1.6
CDH4P55283 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH4P55283 RNA5SP345-201ENST00000410646 108 ntBASIC5.03□□□□□ -1.6
CDH4P55283 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH4P55283 MTCO1P51-201ENST00000427672 1060 ntBASIC5.03□□□□□ -1.6
CDH4P55283 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH4P55283 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH4P55283 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH4P55283 AC092324.1-201ENST00000468671 324 ntBASIC5.03□□□□□ -1.6
CDH4P55283 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH4P55283 RN7SL591P-201ENST00000496150 292 ntBASIC5.03□□□□□ -1.6
CDH4P55283 RNA5SP392-201ENST00000516905 112 ntBASIC5.03□□□□□ -1.6
CDH4P55283 RPL23AP53-201ENST00000521854 457 ntBASIC5.03□□□□□ -1.6
CDH4P55283 MORF4L1P3-201ENST00000525966 950 ntBASIC5.03□□□□□ -1.6
CDH4P55283 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH4P55283 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH4P55283 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH4P55283 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH4P55283 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH4P55283 AP000919.1-201ENST00000582850 985 ntBASIC5.03□□□□□ -1.6
CDH4P55283 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH4P55283 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH4P55283 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH4P55283 AC008536.1-201ENST00000602872 669 ntBASIC5.03□□□□□ -1.6
CDH4P55283 AC010424.2-201ENST00000607594 443 ntBASIC5.03□□□□□ -1.6
CDH4P55283 FAM25E-202ENST00000608562 189 ntBASIC5.03□□□□□ -1.6
CDH4P55283 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.03□□□□□ -1.6
CDH4P55283 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.03□□□□□ -1.6
CDH4P55283 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CDH4P55283 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.03□□□□□ -1.6
CDH4P55283 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CDH4P55283 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms